AI Grammar Rephrase

AI Grammar Rephrase — independent reviews, comparisons, pricing and step-by-step guides on Aizhi.

  • Law practice management software

    Law practice management software

    Law practice management software is software designed to manage the business operations of a law firm. This can include software that manages cases, client intake, court communications, electronic discovery, time tracking, trust accounting, and billing. == Features of law practice management software == Common features of practice management software include: Case management Time tracking Document assembly Contact management Calendaring Docket management Client portal Contract Management Court Case Status Tracker Trust accounting == Examples of law practice management software == Smokeball LEAP Legal Software PracticeEvolve Dye & Durham

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  • Mutation (evolutionary algorithm)

    Mutation (evolutionary algorithm)

    Mutation is a genetic operator used to maintain genetic diversity of the chromosomes of a population of an evolutionary algorithm (EA), including genetic algorithms in particular. It is analogous to biological mutation. The classic example of a mutation operator of a binary coded genetic algorithm (GA) involves a probability that an arbitrary bit in a genetic sequence will be flipped from its original state. A common method of implementing the mutation operator involves generating a random variable for each bit in a sequence. This random variable tells whether or not a particular bit will be flipped. This mutation procedure, based on the biological point mutation, is called single point mutation. Other types of mutation operators are commonly used for representations other than binary, such as floating-point encodings or representations for combinatorial problems. The purpose of mutation in EAs is to introduce diversity into the sampled population. Mutation operators are used in an attempt to avoid local minima by preventing the population of chromosomes from becoming too similar to each other, thus slowing or even stopping convergence to the global optimum. This reasoning also leads most EAs to avoid only taking the fittest of the population in generating the next generation, but rather selecting a random (or semi-random) set with a weighting toward those that are fitter. The following requirements apply to all mutation operators used in an EA: every point in the search space must be reachable by one or more mutations. there must be no preference for parts or directions in the search space (no drift). small mutations should be more probable than large ones. For different genome types, different mutation types are suitable. Some mutations are Gaussian, Uniform, Zigzag, Scramble, Insertion, Inversion, Swap, and so on. An overview and more operators than those presented below can be found in the introductory book by Eiben and Smith or in. == Bit string mutation == The mutation of bit strings ensue through bit flips at random positions. Example: The probability of a mutation of a bit is 1 l {\displaystyle {\frac {1}{l}}} , where l {\displaystyle l} is the length of the binary vector. Thus, a mutation rate of 1 {\displaystyle 1} per mutation and individual selected for mutation is reached. == Mutation of real numbers == Many EAs, such as the evolution strategy or the real-coded genetic algorithms, work with real numbers instead of bit strings. This is due to the good experiences that have been made with this type of coding. The value of a real-valued gene can either be changed or redetermined. A mutation that implements the latter should only ever be used in conjunction with the value-changing mutations and then only with comparatively low probability, as it can lead to large changes. In practical applications, the respective value range of the decision variables to be changed of the optimisation problem to be solved is usually limited. Accordingly, the values of the associated genes are each restricted to an interval [ x min , x max ] {\displaystyle [x_{\min },x_{\max }]} . Mutations may or may not take these restrictions into account. In the latter case, suitable post-treatment is then required as described below. === Mutation without consideration of restrictions === A real number x {\displaystyle x} can be mutated using normal distribution N ( 0 , σ ) {\displaystyle {\mathcal {N}}(0,\sigma )} by adding the generated random value to the old value of the gene, resulting in the mutated value x ′ {\displaystyle x'} : x ′ = x + N ( 0 , σ ) {\displaystyle x'=x+{\mathcal {N}}(0,\sigma )} In the case of genes with a restricted range of values, it is a good idea to choose the step size of the mutation σ {\displaystyle \sigma } so that it reasonably fits the range [ x min , x max ] {\displaystyle [x_{\min },x_{\max }]} of the gene to be changed, e.g.: σ = x max − x min 6 {\displaystyle \sigma ={\frac {x_{\text{max}}-x_{\text{min}}}{6}}} The step size can also be adjusted to the smaller permissible change range depending on the current value. In any case, however, it is likely that the new value x ′ {\displaystyle x'} of the gene will be outside the permissible range of values. Such a case must be considered a lethal mutation, since the obvious repair by using the respective violated limit as the new value of the gene would lead to a drift. This is because the limit value would then be selected with the entire probability of the values beyond the limit of the value range. The evolution strategy works with real numbers and mutation based on normal distribution. The step sizes are part of the chromosome and are subject to evolution together with the actual decision variables. === Mutation with consideration of restrictions === One possible form of changing the value of a gene while taking its value range [ x min , x max ] {\displaystyle [x_{\min },x_{\max }]} into account is the mutation relative parameter change of the evolutionary algorithm GLEAM (General Learning Evolutionary Algorithm and Method), in which, as with the mutation presented earlier, small changes are more likely than large ones. First, an equally distributed decision is made as to whether the current value x {\displaystyle x} should be increased or decreased and then the corresponding total change interval is determined. Without loss of generality, an increase is assumed for the explanation and the total change interval is then [ x , x max ] {\displaystyle [x,x_{\max }]} . It is divided into k {\displaystyle k} sub-areas of equal size with the width δ {\displaystyle \delta } , from which k {\displaystyle k} sub-change intervals of different size are formed: i {\displaystyle i} -th sub-change interval: [ x , x + δ ⋅ i ] {\displaystyle [x,x+\delta \cdot i]} with δ = ( x max − x ) k {\displaystyle \delta ={\frac {(x_{\text{max}}-x)}{k}}} and i = 1 , … , k {\displaystyle i=1,\dots ,k} Subsequently, one of the k {\displaystyle k} sub-change intervals is selected in equal distribution and a random number, also equally distributed, is drawn from it as the new value x ′ {\displaystyle x'} of the gene. The resulting summed probabilities of the sub-change intervals result in the probability distribution of the k {\displaystyle k} sub-areas shown in the adjacent figure for the exemplary case of k = 10 {\displaystyle k=10} . This is not a normal distribution as before, but this distribution also clearly favours small changes over larger ones. This mutation for larger values of k {\displaystyle k} , such as 10, is less well suited for tasks where the optimum lies on one of the value range boundaries. This can be remedied by significantly reducing k {\displaystyle k} when a gene value approaches its limits very closely. === Common properties === For both mutation operators for real-valued numbers, the probability of an increase and decrease is independent of the current value and is 50% in each case. In addition, small changes are considerably more likely than large ones. For mixed-integer optimization problems, rounding is usually used. == Mutation of permutations == Mutations of permutations are specially designed for genomes that are themselves permutations of a set. These are often used to solve combinatorial tasks. In the two mutations presented, parts of the genome are rotated or inverted. === Rotation to the right === The presentation of the procedure is illustrated by an example on the right: === Inversion === The presentation of the procedure is illustrated by an example on the right: === Variants with preference for smaller changes === The requirement raised at the beginning for mutations, according to which small changes should be more probable than large ones, is only inadequately fulfilled by the two permutation mutations presented, since the lengths of the partial lists and the number of shift positions are determined in an equally distributed manner. However, the longer the partial list and the shift, the greater the change in gene order. This can be remedied by the following modifications. The end index j {\displaystyle j} of the partial lists is determined as the distance d {\displaystyle d} to the start index i {\displaystyle i} : j = ( i + d ) mod | P 0 | {\displaystyle j=(i+d){\bmod {\left|P_{0}\right|}}} where d {\displaystyle d} is determined randomly according to one of the two procedures for the mutation of real numbers from the interval [ 0 , | P 0 | − 1 ] {\displaystyle \left[0,\left|P_{0}\right|-1\right]} and rounded. For the rotation, k {\displaystyle k} is determined similarly to the distance d {\displaystyle d} , but the value 0 {\displaystyle 0} is forbidden. For the inversion, note that i ≠ j {\displaystyle i\neq j} must hold, so for d {\displaystyle d} the value 0 {\displaystyle 0} must be excluded.

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  • Fitness approximation

    Fitness approximation

    Fitness approximation aims to approximate the objective or fitness functions in evolutionary optimization by building up machine learning models based on data collected from numerical simulations or physical experiments. The machine learning models for fitness approximation are also known as meta-models or surrogates, and evolutionary optimization based on approximated fitness evaluations are also known as surrogate-assisted evolutionary approximation. Fitness approximation in evolutionary optimization can be seen as a sub-area of data-driven evolutionary optimization. == Approximate models in function optimization == === Motivation === In many real-world optimization problems including engineering problems, the number of fitness function evaluations needed to obtain a good solution dominates the optimization cost. In order to obtain efficient optimization algorithms, it is crucial to use prior information gained during the optimization process. Conceptually, a natural approach to utilizing the known prior information is building a model of the fitness function to assist in the selection of candidate solutions for evaluation. A variety of techniques for constructing such a model, often also referred to as surrogates, metamodels or approximation models – for computationally expensive optimization problems have been considered. === Approaches === Common approaches to constructing approximate models based on learning and interpolation from known fitness values of a small population include: Low-degree polynomials and regression models Fourier surrogate modeling Artificial neural networks including Multilayer perceptrons Radial basis function network Support vector machines Due to the limited number of training samples and high dimensionality encountered in engineering design optimization, constructing a globally valid approximate model remains difficult. As a result, evolutionary algorithms using such approximate fitness functions may converge to local optima. Therefore, it can be beneficial to selectively use the original fitness function together with the approximate model.

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  • Sample exclusion dimension

    Sample exclusion dimension

    In computational learning theory, sample exclusion dimensions arise in the study of exact concept learning with queries. In algorithmic learning theory, a concept over a domain X is a Boolean function over X. Here we only consider finite domains. A partial approximation S of a concept c is a Boolean function over Y ⊆ X {\displaystyle Y\subseteq X} such that c is an extension to S. Let C be a class of concepts and c be a concept (not necessarily in C). Then a specifying set for c w.r.t. C, denoted by S is a partial approximation S of c such that C contains at most one extension to S. If we have observed a specifying set for some concept w.r.t. C, then we have enough information to verify a concept in C with at most one more mind change. The exclusion dimension, denoted by XD(C), of a concept class is the maximum of the size of the minimum specifying set of c' with respect to C, where c' is a concept not in C.

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  • Semantic space

    Semantic space

    Semantic spaces in the natural language domain aim to create representations of natural language that are capable of capturing meaning. The original motivation for semantic spaces stems from two core challenges of natural language: Vocabulary mismatch (the fact that the same meaning can be expressed in many ways) and ambiguity of natural language (the fact that the same term can have several meanings). The application of semantic spaces in natural language processing (NLP) aims at overcoming limitations of rule-based or model-based approaches operating on the keyword level. The main drawback with these approaches is their brittleness, and the large manual effort required to create either rule-based NLP systems or training corpora for model learning. Rule-based and machine learning based models are fixed on the keyword level and break down if the vocabulary differs from that defined in the rules or from the training material used for the statistical models. Research in semantic spaces dates back more than 20 years. In 1996, two papers were published that raised a lot of attention around the general idea of creating semantic spaces: latent semantic analysis and Hyperspace Analogue to Language. However, their adoption was limited by the large computational effort required to construct and use those semantic spaces. A breakthrough with regard to the accuracy of modelling associative relations between words (e.g. "spider-web", "lighter-cigarette", as opposed to synonymous relations such as "whale-dolphin", "astronaut-driver") was achieved by explicit semantic analysis (ESA) in 2007. ESA was a novel (non-machine learning) based approach that represented words in the form of vectors with 100,000 dimensions (where each dimension represents an Article in Wikipedia). However practical applications of the approach are limited due to the large number of required dimensions in the vectors. More recently, advances in neural network techniques in combination with other new approaches (tensors) led to a host of new recent developments: Word2vec from Google, GloVe from Stanford University, and fastText from Facebook AI Research (FAIR) labs.

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  • Teaching dimension

    Teaching dimension

    In computational learning theory, the teaching dimension of a concept class C is defined to be max c ∈ C { w C ( c ) } {\displaystyle \max _{c\in C}\{w_{C}(c)\}} , where w C ( c ) {\displaystyle {w_{C}(c)}} is the minimum size of a witness set for c in C. Intuitively, this measures the number of instances that are needed to identify a concept in the class, using supervised learning with examples provided by a helpful teacher who is trying to convey the concept as succinctly as possible. This definition was formulated in 1995 by Sally Goldman and Michael Kearns, based on earlier work by Goldman, Ron Rivest, and Robert Schapire. The teaching dimension of a finite concept class can be used to give a lower and an upper bound on the membership query cost of the concept class. In Stasys Jukna's book "Extremal Combinatorics", a lower bound is given for the teaching dimension in general: Let C be a concept class over a finite domain X. If the size of C is greater than 2 k ( | X | k ) , {\displaystyle 2^{k}{|X| \choose k},} then the teaching dimension of C is greater than k. However, there are more specific teaching models that make assumptions about teacher or learner, and can get lower values for the teaching dimension. For instance, several models are the classical teaching (CT) model, the optimal teacher (OT) model, recursive teaching (RT), preference-based teaching (PBT), and non-clashing teaching (NCT).

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  • Neural cryptography

    Neural cryptography

    Neural cryptography is a branch of cryptography dedicated to analyzing the application of stochastic algorithms, especially artificial neural network algorithms, for use in encryption and cryptanalysis. == Definition == Artificial neural networks are well known for their ability to selectively explore the solution space of a given problem. This feature finds a natural niche of application in the field of cryptanalysis. At the same time, neural networks offer a new approach to attack ciphering algorithms based on the principle that any function could be reproduced by a neural network, which is a powerful proven computational tool that can be used to find the inverse-function of any cryptographic algorithm. The ideas of mutual learning, self learning, and stochastic behavior of neural networks and similar algorithms can be used for different aspects of cryptography, like public-key cryptography, solving the key distribution problem using neural network mutual synchronization, hashing or generation of pseudo-random numbers. Another idea is the ability of a neural network to separate space in non-linear pieces using "bias". It gives different probabilities of activating the neural network or not. This is very useful in the case of Cryptanalysis. Two names are used to design the same domain of research: Neuro-Cryptography and Neural Cryptography. The first work that it is known on this topic can be traced back to 1995 in an IT Master Thesis. == Applications == In 1995, Sebastien Dourlens applied neural networks to cryptanalyze DES by allowing the networks to learn how to invert the S-tables of the DES. The bias in DES studied through Differential Cryptanalysis by Adi Shamir is highlighted. The experiment shows about 50% of the key bits can be found, allowing the complete key to be found in a short time. Hardware application with multi micro-controllers have been proposed due to the easy implementation of multilayer neural networks in hardware. One example of a public-key protocol is given by Khalil Shihab . He describes the decryption scheme and the public key creation that are based on a backpropagation neural network. The encryption scheme and the private key creation process are based on Boolean algebra. This technique has the advantage of small time and memory complexities. A disadvantage is the property of backpropagation algorithms: because of huge training sets, the learning phase of a neural network is very long. Therefore, the use of this protocol is only theoretical so far. == Neural key exchange protocol == The most used protocol for key exchange between two parties A and B in the practice is Diffie–Hellman key exchange protocol. Neural key exchange, which is based on the synchronization of two tree parity machines, should be a secure replacement for this method. Synchronizing these two machines is similar to synchronizing two chaotic oscillators in chaos communications. === Tree parity machine === The tree parity machine is a special type of multi-layer feedforward neural network. It consists of one output neuron, K hidden neurons and K×N input neurons. Inputs to the network take three values: x i j ∈ { − 1 , 0 , + 1 } {\displaystyle x_{ij}\in \left\{-1,0,+1\right\}} The weights between input and hidden neurons take the values: w i j ∈ { − L , . . . , 0 , . . . , + L } {\displaystyle w_{ij}\in \left\{-L,...,0,...,+L\right\}} Output value of each hidden neuron is calculated as a sum of all multiplications of input neurons and these weights: σ i = sgn ⁡ ( ∑ j = 1 N w i j x i j ) {\displaystyle \sigma _{i}=\operatorname {sgn}(\sum _{j=1}^{N}w_{ij}x_{ij})} Signum is a simple function, which returns −1,0 or 1: sgn ⁡ ( x ) = { − 1 if x < 0 , 0 if x = 0 , 1 if x > 0. {\displaystyle \operatorname {sgn}(x)={\begin{cases}-1&{\text{if }}x<0,\\0&{\text{if }}x=0,\\1&{\text{if }}x>0.\end{cases}}} If the scalar product is 0, the output of the hidden neuron is mapped to −1 in order to ensure a binary output value. The output of neural network is then computed as the multiplication of all values produced by hidden elements: τ = ∏ i = 1 K σ i {\displaystyle \tau =\prod _{i=1}^{K}\sigma _{i}} Output of the tree parity machine is binary. === Protocol === Each party (A and B) uses its own tree parity machine. Synchronization of the tree parity machines is achieved in these steps Initialize random weight values Execute these steps until the full synchronization is achieved Generate random input vector X Compute the values of the hidden neurons Compute the value of the output neuron Compare the values of both tree parity machines Outputs are the same: one of the suitable learning rules is applied to the weights Outputs are different: go to 2.1 After the full synchronization is achieved (the weights wij of both tree parity machines are same), A and B can use their weights as keys. This method is known as a bidirectional learning. One of the following learning rules can be used for the synchronization: Hebbian learning rule: w i + = g ( w i + σ i x i Θ ( σ i τ ) Θ ( τ A τ B ) ) {\displaystyle w_{i}^{+}=g(w_{i}+\sigma _{i}x_{i}\Theta (\sigma _{i}\tau )\Theta (\tau ^{A}\tau ^{B}))} Anti-Hebbian learning rule: w i + = g ( w i − σ i x i Θ ( σ i τ ) Θ ( τ A τ B ) ) {\displaystyle w_{i}^{+}=g(w_{i}-\sigma _{i}x_{i}\Theta (\sigma _{i}\tau )\Theta (\tau ^{A}\tau ^{B}))} Random walk: w i + = g ( w i + x i Θ ( σ i τ ) Θ ( τ A τ B ) ) {\displaystyle w_{i}^{+}=g(w_{i}+x_{i}\Theta (\sigma _{i}\tau )\Theta (\tau ^{A}\tau ^{B}))} Where: Θ ( a , b ) = 0 {\displaystyle \Theta (a,b)=0} if a ≠ b {\displaystyle a\neq b} otherwise Θ ( a , b ) = 1 {\displaystyle \Theta (a,b)=1} And: g ( x ) {\displaystyle g(x)} is a function that keeps the w i {\displaystyle w_{i}} in the range { − L , − L + 1 , . . . , 0 , . . . , L − 1 , L } {\displaystyle \{-L,-L+1,...,0,...,L-1,L\}} === Attacks and security of this protocol === In every attack it is considered, that the attacker E can eavesdrop messages between the parties A and B, but does not have an opportunity to change them. ==== Brute force ==== To provide a brute force attack, an attacker has to test all possible keys (all possible values of weights wij). By K hidden neurons, K×N input neurons and boundary of weights L, this gives (2L+1)KN possibilities. For example, the configuration K = 3, L = 3 and N = 100 gives us 310253 key possibilities, making the attack impossible with today's computer power. ==== Learning with own tree parity machine ==== One of the basic attacks can be provided by an attacker, who owns the same tree parity machine as the parties A and B. He wants to synchronize his tree parity machine with these two parties. In each step there are three situations possible: Output(A) ≠ Output(B): None of the parties updates its weights. Output(A) = Output(B) = Output(E): All the three parties update weights in their tree parity machines. Output(A) = Output(B) ≠ Output(E): Parties A and B update their tree parity machines, but the attacker can not do that. Because of this situation his learning is slower than the synchronization of parties A and B. It has been proven, that the synchronization of two parties is faster than learning of an attacker. It can be improved by increasing of the synaptic depth L of the neural network. That gives this protocol enough security and an attacker can find out the key only with small probability. ==== Other attacks ==== For conventional cryptographic systems, we can improve the security of the protocol by increasing of the key length. In the case of neural cryptography, we improve it by increasing of the synaptic depth L of the neural networks. Changing this parameter increases the cost of a successful attack exponentially, while the effort for the users grows polynomially. Therefore, breaking the security of neural key exchange belongs to the complexity class NP. Alexander Klimov, Anton Mityaguine, and Adi Shamir say that the original neural synchronization scheme can be broken by at least three different attacks—geometric, probabilistic analysis, and using genetic algorithms. Even though this particular implementation is insecure, the ideas behind chaotic synchronization could potentially lead to a secure implementation. === Permutation parity machine === The permutation parity machine is a binary variant of the tree parity machine. It consists of one input layer, one hidden layer and one output layer. The number of neurons in the output layer depends on the number of hidden units K. Each hidden neuron has N binary input neurons: x i j ∈ { 0 , 1 } {\displaystyle x_{ij}\in \left\{0,1\right\}} The weights between input and hidden neurons are also binary: w i j ∈ { 0 , 1 } {\displaystyle w_{ij}\in \left\{0,1\right\}} Output value of each hidden neuron is calculated as a sum of all exclusive disjunctions (exclusive or) of input neurons and these weights: σ i = θ N ( ∑ j = 1 N w i j ⊕ x i j ) {\displaystyle \sigma _{i}=\theta _{N}(\sum _{j=1}^{N}w_{ij}\oplus x_{ij})} (⊕ means XOR). Th

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  • Bioz

    Bioz

    Bioz is a search engine for life science experimentation. == History == Bioz was founded by Karin Lachmi and Daniel Levitt. Lachmi is a scientist who completed her postdoc in molecular and cellular biology at the Stanford University School of Medicine. During her lab work she found little available data regarding preferable lab tools, reagents and related products for experimentation. There are 50,000 vendors selling 300 million scientific products. She decided to start the company in order to provide researchers with adequate information for that purpose. Co-founder Daniel Levitt is an entrepreneur who sold his company WebAppoint to Microsoft in the year 2000. He also co-founded the company StemRad. At Bioz, Lachmi serves as the Chief Scientific Officer and Levitt serves as the chief executive officer. Bioz claims to have over a million researcher-users from 196 countries. Among the investors are Esther Dyson and the Stanford-StartX Fund. The company's advisory board includes Nobel Laureates in Chemistry Michael Levitt, Roger Kornberg, and Ada Yonath. == Technology == The company uses artificial intelligence, machine learning and natural language processing in order to extract experimentation data from scientific articles, such as the products that researchers used, the companies that supply the products, the protocol conditions that researchers selected, and the types of experiments and techniques. The algorithm ranks products based on how frequently they were used by researchers in their experiments, how recently a product was used, and the impact factor of the journal. The algorithm's output is a Bioz stars score for each product that was mentioned in an article. Bioz is a data-driven platform for product recommendations, which is contrary to platforms such as TripAdvisor and OpenTable that are based on user-generated reviews and ratings. The recommendations and scoring system that the company has developed are meant to assist researchers with the process of developing future medications and finding cures for diseases. They are guided towards products and techniques that were previously used by other researchers when planning and performing experiments. The company's revenue is based on selling SaaS subscriptions to researchers in biopharma companies. They also charge product suppliers for content syndication.

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  • Data cube

    Data cube

    In computer programming, a data cube (or datacube) is a multi-dimensional array of values. Typically, the term "data cube" is applied in contexts where these arrays are massively larger than the hosting computer's main memory; examples include multi-terabyte/petabyte data warehouses and time series of image data. Even though it is called a cube, a data cube generally is a multi-dimensional concept which can be 1-dimensional, 2-dimensional, 3-dimensional, or higher-dimensional. The data cube is used to represent data (sometimes called facts) along some dimensions of interest. In satellite image timeseries, dimensions would be latitude and longitude coordinates and time; a fact (sometimes called measure) would be a pixel at a given space and time as taken by the satellite. For example, in online analytical processing, an OLAP cube about a company would have dimensions that could be the company subsidiaries, the company products, and time; in this setup, a fact would be a sales event where a particular product has been sold in a particular subsidiary at a particular time. In any case, every dimension divides data into groups of cells whereas each cell in the cube represents a single measure of interest. Sometimes cubes hold only a few values with the rest being empty, i.e. undefined, while sometimes most or all cube coordinates hold a cell value. In the first case such data are called sparse, and in the second case they are called dense, although there is no hard delineation between the two. Data cubes may be stored in database management systems (DBMS) as part of array DBMS. Spatio-temporal databases and geospatial databases may also be represented as coverage data. == History == Multi-dimensional arrays have long been familiar in programming languages. Fortran offers arbitrarily-indexed 1-D arrays and arrays of arrays, which allows the construction of higher-dimensional arrays, up to 15 dimensions. APL supports n-D arrays with a rich set of operations. All these have in common that arrays must fit into the main memory and are available only while the particular program maintaining them (such as image processing software) is running. A series of data exchange formats support storage and transmission of data cube-like data, often tailored towards particular application domains. Examples include MDX for statistical (in particular, business) data, Zarr and Hierarchical Data Format for general scientific data, and TIFF for imagery. In 1992, Peter Baumann introduced management of massive data cubes with high-level user functionality combined with an efficient software architecture. Datacube operations include subset extraction, processing, fusion, and in general queries in the spirit of data manipulation languages like SQL. Some years after, the data cube concept was applied to describe time-varying business data as data cubes by Jim Gray, et al., and by Venky Harinarayan, Anand Rajaraman and Jeff Ullman. Around that time, a working group on Multi-Dimensional Databases ("Arbeitskreis Multi-Dimensionale Datenbanken") was established at German Gesellschaft für Informatik. Datacube Inc. was an image processing company selling hardware and software applications for the PC market in 1996, however without addressing data cubes as such. The EarthServer initiative has established geo data cube service requirements. == Standardization == In 2018, the ISO SQL database language was extended with data cube functionality as "SQL – Part 15: Multi-dimensional arrays (SQL/MDA)". Web Coverage Processing Service is a geo data cube analytics language issued by the Open Geospatial Consortium in 2008. In addition to the common data cube operations, the language knows about the semantics of space and time and supports both regular and irregular grid data cubes, based on the concept of coverage data. An industry standard for querying business data cubes, originally developed by Microsoft, is MultiDimensional eXpressions. == Implementation == Many high-level computer languages treat data cubes and other large arrays as single entities distinct from their contents. These languages, of which Fortran, APL, IDL, NumPy, PDL, and S-Lang are examples, allow the programmer to manipulate complete film clips and other data en masse with simple expressions derived from linear algebra and vector mathematics. Some languages (such as PDL) distinguish between a list of images and a data cube, while many (such as IDL) do not. Array DBMSs (Database Management Systems) offer a data model which generically supports definition, management, retrieval, and manipulation of n-dimensional data cubes. This database category has been pioneered by the rasdaman system since 1994. == Applications == Multi-dimensional arrays can meaningfully represent spatio-temporal sensor, image, and simulation data, but also statistics data where the semantics of dimensions is not necessarily of spatial or temporal nature. Generally, any kind of axis can be combined with any other into a data cube. === Mathematics === In mathematics, a one-dimensional array corresponds to a vector, a two-dimensional array resembles a matrix; more generally, a tensor may be represented as an n-dimensional data cube. === Science and engineering === For a time sequence of color images, the array is generally four-dimensional, with the dimensions representing image X and Y coordinates, time, and RGB (or other color space) color plane. For example, the EarthServer initiative unites data centers from different continents offering 3-D x/y/t satellite image timeseries and 4-D x/y/z/t weather data for retrieval and server-side processing through the Open Geospatial Consortium WCPS geo data cube query language standard. A data cube is also used in the field of imaging spectroscopy, since a spectrally-resolved image is represented as a three-dimensional volume. Earth observation data cubes combine satellite imagery such as Landsat 8 and Sentinel-2 with Geographic information system analytics. === Business intelligence === In online analytical processing (OLAP), data cubes are a common arrangement of business data suitable for analysis from different perspectives through operations like slicing, dicing, pivoting, and aggregation.

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  • Pruning (artificial neural network)

    Pruning (artificial neural network)

    In deep learning, pruning is the practice of removing parameters from an existing artificial neural network. The goal of this process is to reduce the size (parameter count) of the neural network (and therefore the computational resources required to run it) whilst maintaining accuracy. This can be compared to the biological process of synaptic pruning which takes place in mammalian brains during development. == Node (neuron) pruning == A basic algorithm for pruning is as follows: Evaluate the importance of each neuron. Rank the neurons according to their importance (assuming there is a clearly defined measure for "importance"). Remove the least important neuron. Check a termination condition (to be determined by the user) to see whether to continue pruning. == Edge (weight) pruning == Most work on neural network pruning does not remove full neurons or layers (structured pruning). Instead, it focuses on removing the most insignificant weights (unstructured pruning), namely, setting their values to zero. This can either be done globally by comparing weights from all layers in the network or locally by comparing weights in each layer separately. Different metrics can be used to measure the importance of each weight. Weight magnitude as well as combinations of weight and gradient information are commonly used metrics. Early work suggested also to change the values of non-pruned weights. == When to prune the neural network? == Pruning can be applied at three different stages: before training, during training, or after training. When pruning is performed during or after training, additional fine-tuning epochs are typically required. Each approach involves different trade-offs between accuracy and computational cost.

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  • Statistical classification

    Statistical classification

    When classification is performed by a computer, statistical methods are normally used to develop the algorithm. Often, the individual observations are analyzed into a set of quantifiable properties, known variously as explanatory variables or features. These properties may variously be categorical (e.g. "A", "B", "AB" or "O", for blood type), ordinal (e.g. "large", "medium" or "small"), integer-valued (e.g. the number of occurrences of a particular word in an email) or real-valued (e.g. a measurement of blood pressure). Other classifiers work by comparing observations to previous observations by means of a similarity or distance function. An algorithm that implements classification, especially in a concrete implementation, is known as a classifier. The term "classifier" sometimes also refers to the mathematical function, implemented by a classification algorithm, that maps input data to a category. Terminology across fields is quite varied. In statistics, where classification is often done with logistic regression or a similar procedure, the properties of observations are termed explanatory variables (or independent variables, regressors, etc.), and the categories to be predicted are known as outcomes, which are considered to be possible values of the dependent variable. In machine learning, the observations are often known as instances, the explanatory variables are termed features (grouped into a feature vector), and the possible categories to be predicted are classes. Other fields may use different terminology: e.g. in community ecology, the term "classification" normally refers to cluster analysis. == Relation to other problems == Classification and clustering are examples of the more general problem of pattern recognition, which is the assignment of some sort of output value to a given input value. Other examples are regression, which assigns a real-valued output to each input; sequence labeling, which assigns a class to each member of a sequence of values (for example, part of speech tagging, which assigns a part of speech to each word in an input sentence); parsing, which assigns a parse tree to an input sentence, describing the syntactic structure of the sentence; etc. A common subclass of classification is probabilistic classification. Algorithms of this nature use statistical inference to find the best class for a given instance. Unlike other algorithms, which simply output a "best" class, probabilistic algorithms output a probability of the instance being a member of each of the possible classes. The best class is normally then selected as the one with the highest probability. However, such an algorithm has numerous advantages over non-probabilistic classifiers: It can output a confidence value associated with its choice (in general, a classifier that can do this is known as a confidence-weighted classifier). Correspondingly, it can abstain when its confidence of choosing any particular output is too low. Because of the probabilities which are generated, probabilistic classifiers can be more effectively incorporated into larger machine-learning tasks, in a way that partially or completely avoids the problem of error propagation. == Frequentist procedures == Early work on statistical classification was undertaken by Fisher, in the context of two-group problems, leading to Fisher's linear discriminant function as the rule for assigning a group to a new observation. This early work assumed that data-values within each of the two groups had a multivariate normal distribution. The extension of this same context to more than two groups has also been considered with a restriction imposed that the classification rule should be linear. Later work for the multivariate normal distribution allowed the classifier to be nonlinear: several classification rules can be derived based on different adjustments of the Mahalanobis distance, with a new observation being assigned to the group whose centre has the lowest adjusted distance from the observation. == Bayesian procedures == Unlike frequentist procedures, Bayesian classification procedures provide a natural way of taking into account any available information about the relative sizes of the different groups within the overall population. Bayesian procedures tend to be computationally expensive and, in the days before Markov chain Monte Carlo computations were developed, approximations for Bayesian clustering rules were devised. Some Bayesian procedures involve the calculation of group-membership probabilities: these provide a more informative outcome than a simple attribution of a single group-label to each new observation. == Binary and multiclass classification == Classification can be thought of as two separate problems – binary classification and multiclass classification. In binary classification, a better understood task, only two classes are involved, whereas multiclass classification involves assigning an object to one of several classes. Since many classification methods have been developed specifically for binary classification, multiclass classification often requires the combined use of multiple binary classifiers. == Feature vectors == Most algorithms describe an individual instance whose category is to be predicted using a feature vector of individual, measurable properties of the instance. Each property is termed a feature, also known in statistics as an explanatory variable (or independent variable, although features may or may not be statistically independent). Features may variously be binary (e.g. "on" or "off"); categorical (e.g. "A", "B", "AB" or "O", for blood type); ordinal (e.g. "large", "medium" or "small"); integer-valued (e.g. the number of occurrences of a particular word in an email); or real-valued (e.g. a measurement of blood pressure). If the instance is an image, the feature values might correspond to the pixels of an image; if the instance is a piece of text, the feature values might be occurrence frequencies of different words. Some algorithms work only in terms of discrete data and require that real-valued or integer-valued data be discretized into groups (e.g. less than 5, between 5 and 10, or greater than 10). == Linear classifiers == A large number of algorithms for classification can be phrased in terms of a linear function that assigns a score to each possible category k by combining the feature vector of an instance with a vector of weights, using a dot product. The predicted category is the one with the highest score. This type of score function is known as a linear predictor function and has the following general form: score ⁡ ( X i , k ) = β k ⋅ X i , {\displaystyle \operatorname {score} (\mathbf {X} _{i},k)={\boldsymbol {\beta }}_{k}\cdot \mathbf {X} _{i},} where Xi is the feature vector for instance i, βk is the vector of weights corresponding to category k, and score(Xi, k) is the score associated with assigning instance i to category k. In discrete choice theory, where instances represent people and categories represent choices, the score is considered the utility associated with person i choosing category k. Algorithms with this basic setup are known as linear classifiers. What distinguishes them is the procedure for determining (training) the optimal weights/coefficients and the way that the score is interpreted. Examples of such algorithms include Logistic regression – Statistical model for a binary dependent variable Multinomial logistic regression – Regression for more than two discrete outcomes Probit regression – Statistical regression where the dependent variable can take only two valuesPages displaying short descriptions of redirect targets The perceptron algorithm Support vector machine – Set of methods for supervised statistical learning Linear discriminant analysis – Method used in statistics, pattern recognition, and other fields == Algorithms == Since no single form of classification is appropriate for all data sets, a large toolkit of classification algorithms has been developed. The most commonly used include: Artificial neural networks – Computational model used in machine learningPages displaying short descriptions of redirect targets Boosting (machine learning) – Ensemble learning method Random forest – Tree-based ensemble machine learning methods Genetic programming – Evolving computer programs with techniques analogous to natural genetic processes Gene expression programming – Evolutionary algorithm Multi expression programming Linear genetic programming Kernel estimation – Concept in statisticsPages displaying short descriptions of redirect targets k-nearest neighbor – Non-parametric classification methodPages displaying short descriptions of redirect targets Learning vector quantization Linear classifier – Statistical classification in machine learning Fisher's linear discriminant – Method used in statistics, pattern recognition, and other fieldsPages displaying short descriptions of redirect targets Logistic r

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  • Linear discriminant analysis

    Linear discriminant analysis

    Linear discriminant analysis (LDA), normal discriminant analysis (NDA), canonical variates analysis (CVA), or discriminant function analysis is a generalization of Fisher's linear discriminant, a method used in statistics and other fields, to find a linear combination of features that characterizes or separates two or more classes of objects or events. The resulting combination may be used as a linear classifier, or, more commonly, for dimensionality reduction before later classification. LDA is closely related to analysis of variance (ANOVA) and regression analysis, which also attempt to express one dependent variable as a linear combination of other features or measurements. However, ANOVA uses categorical independent variables and a continuous dependent variable, whereas discriminant analysis has continuous independent variables and a categorical dependent variable (i.e. the class label). Logistic regression and probit regression are more similar to LDA than ANOVA is, as they also explain a categorical variable by the values of continuous independent variables. These other methods are preferable in applications where it is not reasonable to assume that the independent variables have a normal distribution, which is a fundamental assumption of the LDA method. LDA is also closely related to principal component analysis (PCA) and factor analysis in that they both look for linear combinations of variables which best explain the data. LDA explicitly attempts to model the difference between the classes of data. PCA, in contrast, does not take into account any difference in class, and factor analysis builds the feature combinations based on similarities rather than differences. Discriminant analysis is also different from factor analysis in that it is not an interdependence technique: a distinction between independent variables and dependent variables (also called criterion variables) must be made. LDA works when the measurements made on independent variables for each observation are continuous quantities. When dealing with categorical independent variables, the equivalent technique is discriminant correspondence analysis. Discriminant analysis is used when groups are known a priori (unlike in cluster analysis). Each case must have a score on one or more quantitative predictor measures, and a score on a group measure. In simple terms, discriminant function analysis is classification - the act of distributing things into groups, classes or categories of the same type. == History == The original dichotomous discriminant analysis was developed by Sir Ronald Fisher in 1936. It is different from an ANOVA or MANOVA, which is used to predict one (ANOVA) or multiple (MANOVA) continuous dependent variables by one or more independent categorical variables. Discriminant function analysis is useful in determining whether a set of variables is effective in predicting category membership. == LDA for two classes == Consider a set of observations x → {\displaystyle {\vec {x}}} (also called features, attributes, variables or measurements) for each sample of an object or event with known class y {\displaystyle y} . This set of samples is called the training set in a supervised learning context. The classification problem is then to find a good predictor for the class y {\displaystyle y} of any sample of the same distribution (not necessarily from the training set) given only an observation x → {\displaystyle {\vec {x}}} . LDA approaches the problem by assuming that the conditional probability density functions p ( x → | y = 0 ) {\displaystyle p({\vec {x}}|y=0)} and p ( x → | y = 1 ) {\displaystyle p({\vec {x}}|y=1)} are both the normal distribution with mean and covariance parameters ( μ → 0 , Σ 0 ) {\displaystyle \left({\vec {\mu }}_{0},\Sigma _{0}\right)} and ( μ → 1 , Σ 1 ) {\displaystyle \left({\vec {\mu }}_{1},\Sigma _{1}\right)} , respectively. Under this assumption, the Bayes-optimal solution is to predict points as being from the second class if the log of the likelihood ratios is bigger than some threshold T, so that: 1 2 ( x → − μ → 0 ) T Σ 0 − 1 ( x → − μ → 0 ) + 1 2 ln ⁡ | Σ 0 | − 1 2 ( x → − μ → 1 ) T Σ 1 − 1 ( x → − μ → 1 ) − 1 2 ln ⁡ | Σ 1 | > T {\displaystyle {\frac {1}{2}}({\vec {x}}-{\vec {\mu }}_{0})^{\mathrm {T} }\Sigma _{0}^{-1}({\vec {x}}-{\vec {\mu }}_{0})+{\frac {1}{2}}\ln |\Sigma _{0}|-{\frac {1}{2}}({\vec {x}}-{\vec {\mu }}_{1})^{\mathrm {T} }\Sigma _{1}^{-1}({\vec {x}}-{\vec {\mu }}_{1})-{\frac {1}{2}}\ln |\Sigma _{1}|\ >\ T} Without any further assumptions, the resulting classifier is referred to as quadratic discriminant analysis (QDA). LDA instead makes the additional simplifying homoscedasticity assumption (i.e. that the class covariances are identical, so Σ 0 = Σ 1 = Σ {\displaystyle \Sigma _{0}=\Sigma _{1}=\Sigma } ) and that the covariances have full rank. In this case, several terms cancel: x → T Σ 0 − 1 x → = x → T Σ 1 − 1 x → {\displaystyle {\vec {x}}^{\mathrm {T} }\Sigma _{0}^{-1}{\vec {x}}={\vec {x}}^{\mathrm {T} }\Sigma _{1}^{-1}{\vec {x}}} x → T Σ i − 1 μ → i = μ → i T Σ i − 1 x → {\displaystyle {\vec {x}}^{\mathrm {T} }{\Sigma _{i}}^{-1}{\vec {\mu }}_{i}={{\vec {\mu }}_{i}}^{\mathrm {T} }{\Sigma _{i}}^{-1}{\vec {x}}} because both sides are scalar and transpose to each other ( Σ i {\displaystyle \Sigma _{i}} is Hermitian) and the above decision criterion becomes a threshold on the dot product w → T x → > c {\displaystyle {\vec {w}}^{\mathrm {T} }{\vec {x}}>c} for some threshold constant c, where w → = Σ − 1 ( μ → 1 − μ → 0 ) {\displaystyle {\vec {w}}=\Sigma ^{-1}({\vec {\mu }}_{1}-{\vec {\mu }}_{0})} c = 1 2 w → T ( μ → 1 + μ → 0 ) {\displaystyle c={\frac {1}{2}}\,{\vec {w}}^{\mathrm {T} }({\vec {\mu }}_{1}+{\vec {\mu }}_{0})} This means that the criterion of an input x → {\displaystyle {\vec {x}}} being in a class y {\displaystyle y} is purely a function of this linear combination of the known observations. It is often useful to see this conclusion in geometrical terms: the criterion of an input x → {\displaystyle {\vec {x}}} being in a class y {\displaystyle y} is purely a function of projection of multidimensional-space point x → {\displaystyle {\vec {x}}} onto vector w → {\displaystyle {\vec {w}}} (thus, we only consider its direction). In other words, the observation belongs to y {\displaystyle y} if corresponding x → {\displaystyle {\vec {x}}} is located on a certain side of a hyperplane perpendicular to w → {\displaystyle {\vec {w}}} . The location of the plane is defined by the threshold c {\displaystyle c} . == Assumptions == The assumptions of discriminant analysis are the same as those for MANOVA. The analysis is quite sensitive to outliers and the size of the smallest group must be larger than the number of predictor variables. Multivariate normality: Independent variables are normal for each level of the grouping variable. Homogeneity of variance/covariance (homoscedasticity): Variances among group variables are the same across levels of predictors. Can be tested with Box's M statistic. It has been suggested, however, that linear discriminant analysis be used when covariances are equal, and that quadratic discriminant analysis may be used when covariances are not equal. Independence: Participants are assumed to be randomly sampled, and a participant's score on one variable is assumed to be independent of scores on that variable for all other participants. It has been suggested that discriminant analysis is relatively robust to slight violations of these assumptions, and it has also been shown that discriminant analysis may still be reliable when using dichotomous variables (where multivariate normality is often violated). == Discriminant functions == Discriminant analysis works by creating one or more linear combinations of predictors, creating a new latent variable for each function. These functions are called discriminant functions. The number of functions possible is either N g − 1 {\displaystyle N_{g}-1} where N g {\displaystyle N_{g}} = number of groups, or p {\displaystyle p} (the number of predictors), whichever is smaller. The first function created maximizes the differences between groups on that function. The second function maximizes differences on that function, but also must not be correlated with the previous function. This continues with subsequent functions with the requirement that the new function not be correlated with any of the previous functions. Given group j {\displaystyle j} , with R j {\displaystyle \mathbb {R} _{j}} sets of sample space, there is a discriminant rule such that if x ∈ R j {\displaystyle x\in \mathbb {R} _{j}} , then x ∈ j {\displaystyle x\in j} . Discriminant analysis then, finds “good” regions of R j {\displaystyle \mathbb {R} _{j}} to minimize classification error, therefore leading to a high percent correct classified in the classification table. Each function is given a discriminant score to determine how well it predicts group placement. Structure Corr

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  • Molecular graphics

    Molecular graphics

    Molecular graphics is the discipline and philosophy of studying molecules and their properties through graphical representation. IUPAC limits the definition to representations on a "graphical display device". Ever since Dalton's atoms and Kekulé's benzene, there has been a rich history of hand-drawn atoms and molecules, and these representations have had an important influence on modern molecular graphics. Colour molecular graphics are often used on chemistry journal covers artistically. == History == Prior to the use of computer graphics in representing molecular structure, Robert Corey and Linus Pauling developed a system for representing atoms or groups of atoms from hard wood on a scale of 1 inch = 1 angstrom connected by a clamping device to maintain the molecular configuration. These early models also established the CPK coloring scheme that is still used today to differentiate the different types of atoms in molecular models (e.g. carbon = black, oxygen = red, nitrogen = blue, etc). This early model was improved upon in 1966 by W.L. Koltun and are now known as Corey-Pauling-Koltun (CPK) models. The earliest efforts to produce models of molecular structure was done by Project MAC using wire-frame models displayed on a cathode ray tube in the mid 1960s. In 1965, Carroll Johnson distributed the Oak Ridge thermal ellipsoid plot (ORTEP) that visualized molecules as a ball-and-stick model with lines representing the bonds between atoms and ellipsoids to represent the probability of thermal motion. Thermal ellipsoid plots quickly became the de facto standard used in the display of X-ray crystallography data, and are still in wide use today. The first practical use of molecular graphics was a simple display of the protein myoglobin using a wireframe representation in 1966 by Cyrus Levinthal and Robert Langridge working at Project MAC. Among the milestones in high-performance molecular graphics was the work of Nelson Max in "realistic" rendering of macromolecules using reflecting spheres. Initially much of the technology concentrated on high-performance 3D graphics. During the 1970s, methods for displaying 3D graphics using cathode ray tubes were developed using continuous tone computer graphics in combination with electro-optic shutter viewing devices. The first devices used an active shutter 3D system, generating different perspective views for the left and right channel to provide the illusion of three-dimensional viewing. Stereoscopic viewing glasses were designed using lead lanthanum zirconate titanate (PLZT) ceramics as electronically controlled shutter elements. Active 3D glasses require batteries and work in concert with the display to actively change the presentation by the lenses to the wearer's eyes. Many modern 3D glasses use a passive, polarized 3D system that enables the wearer to visualize 3D effects based on their own perception. Passive 3D glasses are more common today since they are less expensive. The requirements of macromolecular crystallography also drove molecular graphics because the traditional techniques of physical model-building could not scale. The first two protein structures solved by molecular graphics without the aid of the Richards' Box were built with Stan Swanson's program FIT on the Vector General graphics display in the laboratory of Edgar Meyer at Texas A&M University: First Marge Legg in Al Cotton's lab at A&M solved a second, higher-resolution structure of staph. nuclease (1975) and then Jim Hogle solved the structure of monoclinic lysozyme in 1976. A full year passed before other graphics systems were used to replace the Richards' Box for modelling into density in 3-D. Alwyn Jones' FRODO program (and later "O") were developed to overlay the molecular electron density determined from X-ray crystallography and the hypothetical molecular structure. === Timeline === == Types == === Ball-and-stick models === In the ball-and-stick model, atoms are drawn as small sphered connected by rods representing the chemical bonds between them. === Space-filling models === In the space-filling model, atoms are drawn as solid spheres to suggest the space they occupy, in proportion to their van der Waals radii. Atoms that share a bond overlap with each other. === Surfaces === In some models, the surface of the molecule is approximated and shaded to represent a physical property of the molecule, such as electronic charge density. === Ribbon diagrams === Ribbon diagrams are schematic representations of protein structure and are one of the most common methods of protein depiction used today. The ribbon shows the overall path and organization of the protein backbone in 3D, and serves as a visual framework on which to hang details of the full atomic structure, such as the balls for the oxygen atoms bound to the active site of myoglobin in the adjacent image. Ribbon diagrams are generated by interpolating a smooth curve through the polypeptide backbone. α-helices are shown as coiled ribbons or thick tubes, β-strands as arrows, and non-repetitive coils or loops as lines or thin tubes. The direction of the polypeptide chain is shown locally by the arrows, and may be indicated overall by a colour ramp along the length of the ribbon.

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  • Tucker decomposition

    Tucker decomposition

    In mathematics, Tucker decomposition decomposes a tensor into a set of matrices and one small core tensor. It is named after Ledyard R. Tucker although it goes back to Hitchcock in 1927. Initially described as a three-mode extension of factor analysis and principal component analysis it may actually be generalized to higher mode analysis, which is also called higher-order singular value decomposition (HOSVD) or the M-mode SVD. The algorithm to which the literature typically refers when discussing the Tucker decomposition or the HOSVD is the M-mode SVD algorithm introduced by Vasilescu and Terzopoulos, but misattributed to Tucker or De Lathauwer etal. It may be regarded as a more flexible PARAFAC (parallel factor analysis) model. In PARAFAC the core tensor is restricted to be "diagonal". In practice, Tucker decomposition is used as a modelling tool. For instance, it is used to model three-way (or higher way) data by means of relatively small numbers of components for each of the three or more modes, and the components are linked to each other by a three- (or higher-) way core array. The model parameters are estimated in such a way that, given fixed numbers of components, the modelled data optimally resemble the actual data in the least squares sense. The model gives a summary of the information in the data, in the same way as principal components analysis does for two-way data. For a 3rd-order tensor T ∈ F n 1 × n 2 × n 3 {\displaystyle T\in F^{n_{1}\times n_{2}\times n_{3}}} , where F {\displaystyle F} is either R {\displaystyle \mathbb {R} } or C {\displaystyle \mathbb {C} } , Tucker Decomposition can be denoted as follows, T = T × 1 U ( 1 ) × 2 U ( 2 ) × 3 U ( 3 ) {\displaystyle T={\mathcal {T}}\times _{1}U^{(1)}\times _{2}U^{(2)}\times _{3}U^{(3)}} where T ∈ F d 1 × d 2 × d 3 {\displaystyle {\mathcal {T}}\in F^{d_{1}\times d_{2}\times d_{3}}} is the core tensor, a 3rd-order tensor that contains the 1-mode, 2-mode and 3-mode singular values of T {\displaystyle T} , which are defined as the Frobenius norm of the 1-mode, 2-mode and 3-mode slices of tensor T {\displaystyle {\mathcal {T}}} respectively. U ( 1 ) , U ( 2 ) , U ( 3 ) {\displaystyle U^{(1)},U^{(2)},U^{(3)}} are unitary matrices in F d 1 × n 1 , F d 2 × n 2 , F d 3 × n 3 {\displaystyle F^{d_{1}\times n_{1}},F^{d_{2}\times n_{2}},F^{d_{3}\times n_{3}}} respectively. The k-mode product (k = 1, 2, 3) of T {\displaystyle {\mathcal {T}}} by U ( k ) {\displaystyle U^{(k)}} is denoted as T × U ( k ) {\displaystyle {\mathcal {T}}\times U^{(k)}} with entries as ( T × 1 U ( 1 ) ) ( i 1 , j 2 , j 3 ) = ∑ j 1 = 1 d 1 T ( j 1 , j 2 , j 3 ) U ( 1 ) ( j 1 , i 1 ) ( T × 2 U ( 2 ) ) ( j 1 , i 2 , j 3 ) = ∑ j 2 = 1 d 2 T ( j 1 , j 2 , j 3 ) U ( 2 ) ( j 2 , i 2 ) ( T × 3 U ( 3 ) ) ( j 1 , j 2 , i 3 ) = ∑ j 3 = 1 d 3 T ( j 1 , j 2 , j 3 ) U ( 3 ) ( j 3 , i 3 ) {\displaystyle {\begin{aligned}({\mathcal {T}}\times _{1}U^{(1)})(i_{1},j_{2},j_{3})&=\sum _{j_{1}=1}^{d_{1}}{\mathcal {T}}(j_{1},j_{2},j_{3})U^{(1)}(j_{1},i_{1})\\({\mathcal {T}}\times _{2}U^{(2)})(j_{1},i_{2},j_{3})&=\sum _{j_{2}=1}^{d_{2}}{\mathcal {T}}(j_{1},j_{2},j_{3})U^{(2)}(j_{2},i_{2})\\({\mathcal {T}}\times _{3}U^{(3)})(j_{1},j_{2},i_{3})&=\sum _{j_{3}=1}^{d_{3}}{\mathcal {T}}(j_{1},j_{2},j_{3})U^{(3)}(j_{3},i_{3})\end{aligned}}} Altogether, the decomposition may also be written more directly as T ( i 1 , i 2 , i 3 ) = ∑ j 1 = 1 d 1 ∑ j 2 = 1 d 2 ∑ j 3 = 1 d 3 T ( j 1 , j 2 , j 3 ) U ( 1 ) ( j 1 , i 1 ) U ( 2 ) ( j 2 , i 2 ) U ( 3 ) ( j 3 , i 3 ) {\displaystyle T(i_{1},i_{2},i_{3})=\sum _{j_{1}=1}^{d_{1}}\sum _{j_{2}=1}^{d_{2}}\sum _{j_{3}=1}^{d_{3}}{\mathcal {T}}(j_{1},j_{2},j_{3})U^{(1)}(j_{1},i_{1})U^{(2)}(j_{2},i_{2})U^{(3)}(j_{3},i_{3})} Taking d i = n i {\displaystyle d_{i}=n_{i}} for all i {\displaystyle i} is always sufficient to represent T {\displaystyle T} exactly, but often T {\displaystyle T} can be compressed or efficiently approximately by choosing d i < n i {\displaystyle d_{i} Read more →

  • Sufficient dimension reduction

    Sufficient dimension reduction

    In statistics, sufficient dimension reduction (SDR) is a paradigm for analyzing data that combines the ideas of dimension reduction with the concept of sufficiency. Dimension reduction has long been a primary goal of regression analysis. Given a response variable y and a p-dimensional predictor vector x {\displaystyle {\textbf {x}}} , regression analysis aims to study the distribution of y ∣ x {\displaystyle y\mid {\textbf {x}}} , the conditional distribution of y {\displaystyle y} given x {\displaystyle {\textbf {x}}} . A dimension reduction is a function R ( x ) {\displaystyle R({\textbf {x}})} that maps x {\displaystyle {\textbf {x}}} to a subset of R k {\displaystyle \mathbb {R} ^{k}} , k < p, thereby reducing the dimension of x {\displaystyle {\textbf {x}}} . For example, R ( x ) {\displaystyle R({\textbf {x}})} may be one or more linear combinations of x {\displaystyle {\textbf {x}}} . A dimension reduction R ( x ) {\displaystyle R({\textbf {x}})} is said to be sufficient if the distribution of y ∣ R ( x ) {\displaystyle y\mid R({\textbf {x}})} is the same as that of y ∣ x {\displaystyle y\mid {\textbf {x}}} . In other words, no information about the regression is lost in reducing the dimension of x {\displaystyle {\textbf {x}}} if the reduction is sufficient. == Graphical motivation == In a regression setting, it is often useful to summarize the distribution of y ∣ x {\displaystyle y\mid {\textbf {x}}} graphically. For instance, one may consider a scatterplot of y {\displaystyle y} versus one or more of the predictors or a linear combination of the predictors. A scatterplot that contains all available regression information is called a sufficient summary plot. When x {\displaystyle {\textbf {x}}} is high-dimensional, particularly when p ≥ 3 {\displaystyle p\geq 3} , it becomes increasingly challenging to construct and visually interpret sufficiency summary plots without reducing the data. Even three-dimensional scatter plots must be viewed via a computer program, and the third dimension can only be visualized by rotating the coordinate axes. However, if there exists a sufficient dimension reduction R ( x ) {\displaystyle R({\textbf {x}})} with small enough dimension, a sufficient summary plot of y {\displaystyle y} versus R ( x ) {\displaystyle R({\textbf {x}})} may be constructed and visually interpreted with relative ease. Hence sufficient dimension reduction allows for graphical intuition about the distribution of y ∣ x {\displaystyle y\mid {\textbf {x}}} , which might not have otherwise been available for high-dimensional data. Most graphical methodology focuses primarily on dimension reduction involving linear combinations of x {\displaystyle {\textbf {x}}} . The rest of this article deals only with such reductions. == Dimension reduction subspace == Suppose R ( x ) = A T x {\displaystyle R({\textbf {x}})=A^{T}{\textbf {x}}} is a sufficient dimension reduction, where A {\displaystyle A} is a p × k {\displaystyle p\times k} matrix with rank k ≤ p {\displaystyle k\leq p} . Then the regression information for y ∣ x {\displaystyle y\mid {\textbf {x}}} can be inferred by studying the distribution of y ∣ A T x {\displaystyle y\mid A^{T}{\textbf {x}}} , and the plot of y {\displaystyle y} versus A T x {\displaystyle A^{T}{\textbf {x}}} is a sufficient summary plot. Without loss of generality, only the space spanned by the columns of A {\displaystyle A} need be considered. Let η {\displaystyle \eta } be a basis for the column space of A {\displaystyle A} , and let the space spanned by η {\displaystyle \eta } be denoted by S ( η ) {\displaystyle {\mathcal {S}}(\eta )} . It follows from the definition of a sufficient dimension reduction that F y ∣ x = F y ∣ η T x , {\displaystyle F_{y\mid x}=F_{y\mid \eta ^{T}x},} where F {\displaystyle F} denotes the appropriate distribution function. Another way to express this property is y ⊥ ⊥ x ∣ η T x , {\displaystyle y\perp \!\!\!\perp {\textbf {x}}\mid \eta ^{T}{\textbf {x}},} or y {\displaystyle y} is conditionally independent of x {\displaystyle {\textbf {x}}} , given η T x {\displaystyle \eta ^{T}{\textbf {x}}} . Then the subspace S ( η ) {\displaystyle {\mathcal {S}}(\eta )} is defined to be a dimension reduction subspace (DRS). === Structural dimensionality === For a regression y ∣ x {\displaystyle y\mid {\textbf {x}}} , the structural dimension, d {\displaystyle d} , is the smallest number of distinct linear combinations of x {\displaystyle {\textbf {x}}} necessary to preserve the conditional distribution of y ∣ x {\displaystyle y\mid {\textbf {x}}} . In other words, the smallest dimension reduction that is still sufficient maps x {\displaystyle {\textbf {x}}} to a subset of R d {\displaystyle \mathbb {R} ^{d}} . The corresponding DRS will be d-dimensional. === Minimum dimension reduction subspace === A subspace S {\displaystyle {\mathcal {S}}} is said to be a minimum DRS for y ∣ x {\displaystyle y\mid {\textbf {x}}} if it is a DRS and its dimension is less than or equal to that of all other DRSs for y ∣ x {\displaystyle y\mid {\textbf {x}}} . A minimum DRS S {\displaystyle {\mathcal {S}}} is not necessarily unique, but its dimension is equal to the structural dimension d {\displaystyle d} of y ∣ x {\displaystyle y\mid {\textbf {x}}} , by definition. If S {\displaystyle {\mathcal {S}}} has basis η {\displaystyle \eta } and is a minimum DRS, then a plot of y versus η T x {\displaystyle \eta ^{T}{\textbf {x}}} is a minimal sufficient summary plot, and it is (d + 1)-dimensional. == Central subspace == If a subspace S {\displaystyle {\mathcal {S}}} is a DRS for y ∣ x {\displaystyle y\mid {\textbf {x}}} , and if S ⊂ S drs {\displaystyle {\mathcal {S}}\subset {\mathcal {S}}_{\text{drs}}} for all other DRSs S drs {\displaystyle {\mathcal {S}}_{\text{drs}}} , then it is a central dimension reduction subspace, or simply a central subspace, and it is denoted by S y ∣ x {\displaystyle {\mathcal {S}}_{y\mid x}} . In other words, a central subspace for y ∣ x {\displaystyle y\mid {\textbf {x}}} exists if and only if the intersection ⋂ S drs {\textstyle \bigcap {\mathcal {S}}_{\text{drs}}} of all dimension reduction subspaces is also a dimension reduction subspace, and that intersection is the central subspace S y ∣ x {\displaystyle {\mathcal {S}}_{y\mid x}} . The central subspace S y ∣ x {\displaystyle {\mathcal {S}}_{y\mid x}} does not necessarily exist because the intersection ⋂ S drs {\textstyle \bigcap {\mathcal {S}}_{\text{drs}}} is not necessarily a DRS. However, if S y ∣ x {\displaystyle {\mathcal {S}}_{y\mid x}} does exist, then it is also the unique minimum dimension reduction subspace. === Existence of the central subspace === While the existence of the central subspace S y ∣ x {\displaystyle {\mathcal {S}}_{y\mid x}} is not guaranteed in every regression situation, there are some rather broad conditions under which its existence follows directly. For example, consider the following proposition from Cook (1998): Let S 1 {\displaystyle {\mathcal {S}}_{1}} and S 2 {\displaystyle {\mathcal {S}}_{2}} be dimension reduction subspaces for y ∣ x {\displaystyle y\mid {\textbf {x}}} . If x {\displaystyle {\textbf {x}}} has density f ( a ) > 0 {\displaystyle f(a)>0} for all a ∈ Ω x {\displaystyle a\in \Omega _{x}} and f ( a ) = 0 {\displaystyle f(a)=0} everywhere else, where Ω x {\displaystyle \Omega _{x}} is convex, then the intersection S 1 ∩ S 2 {\displaystyle {\mathcal {S}}_{1}\cap {\mathcal {S}}_{2}} is also a dimension reduction subspace. It follows from this proposition that the central subspace S y ∣ x {\displaystyle {\mathcal {S}}_{y\mid x}} exists for such x {\displaystyle {\textbf {x}}} . == Methods for dimension reduction == There are many existing methods for dimension reduction, both graphical and numeric. For example, sliced inverse regression (SIR) and sliced average variance estimation (SAVE) were introduced in the 1990s and continue to be widely used. Although SIR was originally designed to estimate an effective dimension reducing subspace, it is now understood that it estimates only the central subspace, which is generally different. More recent methods for dimension reduction include likelihood-based sufficient dimension reduction, estimating the central subspace based on the inverse third moment (or kth moment), estimating the central solution space, graphical regression, envelope model, and the principal support vector machine. For more details on these and other methods, consult the statistical literature. Principal components analysis (PCA) and similar methods for dimension reduction are not based on the sufficiency principle. === Example: linear regression === Consider the regression model y = α + β T x + ε , where ε ⊥ ⊥ x . {\displaystyle y=\alpha +\beta ^{T}{\textbf {x}}+\varepsilon ,{\text{ where }}\varepsilon \perp \!\!\!\perp {\textbf {x}}.} Note that the distribution of y ∣ x {\displaystyle y\mid {\textbf {x}}} is the same as the distribution of y ∣ β T x {\displ

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