The Leiden algorithm is a community detection algorithm developed by Traag et al at Leiden University. It was developed as a modification of the Louvain method. Like the Louvain method, the Leiden algorithm attempts to optimize modularity in extracting communities from networks; however, it addresses key issues present in the Louvain method, namely poorly connected communities and the resolution limit of modularity. == Improvement over Louvain method == Broadly, the Leiden algorithm uses the same two primary phases as the Louvain algorithm: a local node moving step (though, the method by which nodes are considered in Leiden is more efficient) and a graph aggregation step. However, to address the issues with poorly-connected communities and the merging of smaller communities into larger communities (the resolution limit of modularity), the Leiden algorithm employs an intermediate refinement phase in which communities may be split to guarantee that all communities are well-connected. Consider, for example, the following graph: Three communities are present in this graph (each color represents a community). Additionally, the center "bridge" node (represented with an extra circle) is a member of the community represented by blue nodes. Now consider the result of a node-moving step which merges the communities denoted by red and green nodes into a single community (as the two communities are highly connected): Notably, the center "bridge" node is now a member of the larger red community after node moving occurs (due to the greedy nature of the local node moving algorithm). In the Louvain method, such a merging would be followed immediately by the graph aggregation phase. However, this causes a disconnection between two different sections of the community represented by blue nodes. In the Leiden algorithm, the graph is instead refined: The Leiden algorithm's refinement step ensures that the center "bridge" node is kept in the blue community to ensure that it remains intact and connected, despite the potential improvement in modularity from adding the center "bridge" node to the red community. == Graph components == Before defining the Leiden algorithm, it will be helpful to define some of the components of a graph. === Vertices and edges === A graph is composed of vertices (nodes) and edges. Each edge is connected to two vertices, and each vertex may be connected to zero or more edges. Edges are typically represented by straight lines, while nodes are represented by circles or points. In set notation, let V {\displaystyle V} be the set of vertices, and E {\displaystyle E} be the set of edges: V := { v 1 , v 2 , … , v n } E := { e i j , e i k , … , e k l } {\displaystyle {\begin{aligned}V&:=\{v_{1},v_{2},\dots ,v_{n}\}\\E&:=\{e_{ij},e_{ik},\dots ,e_{kl}\}\end{aligned}}} where e i j {\displaystyle e_{ij}} is the directed edge from vertex v i {\displaystyle v_{i}} to vertex v j {\displaystyle v_{j}} . We can also write this as an ordered pair: e i j := ( v i , v j ) {\displaystyle {\begin{aligned}e_{ij}&:=(v_{i},v_{j})\end{aligned}}} === Community === A community is a unique set of nodes: C i ⊆ V C i ⋂ C j = ∅ ∀ i ≠ j {\displaystyle {\begin{aligned}C_{i}&\subseteq V\\C_{i}&\bigcap C_{j}=\emptyset ~\forall ~i\neq j\end{aligned}}} and the union of all communities must be the total set of vertices: V = ⋃ i = 1 C i {\displaystyle {\begin{aligned}V&=\bigcup _{i=1}C_{i}\end{aligned}}} === Partition === A partition is the set of all communities: P = { C 1 , C 2 , … , C n } {\displaystyle {\begin{aligned}{\mathcal {P}}&=\{C_{1},C_{2},\dots ,C_{n}\}\end{aligned}}} == Partition quality == How communities are partitioned is an integral part on the Leiden algorithm. How partitions are decided can depend on how their quality is measured. Additionally, many of these metrics contain parameters of their own that can change the outcome of their communities. === Modularity === Modularity is a highly used quality metric for assessing how well a set of communities partition a graph. The equation for this metric is defined for an adjacency matrix, A, as: Q = 1 2 m ∑ i j ( A i j − k i k j 2 m ) δ ( c i , c j ) {\displaystyle Q={\frac {1}{2m}}\sum _{ij}(A_{ij}-{\frac {k_{i}k_{j}}{2m}})\delta (c_{i},c_{j})} where: A i j {\displaystyle A_{ij}} represents the edge weight between nodes i {\displaystyle i} and j {\displaystyle j} ; see Adjacency matrix; k i {\displaystyle k_{i}} and k j {\displaystyle k_{j}} are the sum of the weights of the edges attached to nodes i {\displaystyle i} and j {\displaystyle j} , respectively; m {\displaystyle m} is the sum of all of the edge weights in the graph; c i {\displaystyle c_{i}} and c j {\displaystyle c_{j}} are the communities to which the nodes i {\displaystyle i} and j {\displaystyle j} belong; and δ {\displaystyle \delta } is Kronecker delta function: δ ( c i , c j ) = { 1 if c i and c j are the same community 0 otherwise {\displaystyle {\begin{aligned}\delta (c_{i},c_{j})&={\begin{cases}1&{\text{if }}c_{i}{\text{ and }}c_{j}{\text{ are the same community}}\\0&{\text{otherwise}}\end{cases}}\end{aligned}}} === Reichardt Bornholdt Potts Model (RB) === One of the most well used metrics for the Leiden algorithm is the Reichardt Bornholdt Potts Model (RB). This model is used by default in most mainstream Leiden algorithm libraries under the name RBConfigurationVertexPartition. This model introduces a resolution parameter γ {\displaystyle \gamma } and is highly similar to the equation for modularity. This model is defined by the following quality function for an adjacency matrix, A, as: Q = ∑ i j ( A i j − γ k i k j 2 m ) δ ( c i , c j ) {\displaystyle Q=\sum _{ij}(A_{ij}-\gamma {\frac {k_{i}k_{j}}{2m}})\delta (c_{i},c_{j})} where: γ {\displaystyle \gamma } represents a linear resolution parameter === Constant Potts Model (CPM) === Another metric similar to RB is the Constant Potts Model (CPM). This metric also relies on a resolution parameter γ {\displaystyle \gamma } The quality function is defined as: H = − ∑ i j ( A i j w i j − γ ) δ ( c i , c j ) {\displaystyle H=-\sum _{ij}(A_{ij}w_{ij}-\gamma )\delta (c_{i},c_{j})} === Understanding Potts Model resolution parameters/Resolution limit === Typically Potts models such as RB or CPM include a resolution parameter in their calculation. Potts models are introduced as a response to the resolution limit problem that is present in modularity maximization based community detection. The resolution limit problem is that, for some graphs, maximizing modularity may cause substructures of a graph to merge and become a single community and thus smaller structures are lost. These resolution parameters allow modularity adjacent methods to be modified to suit the requirements of the user applying the Leiden algorithm to account for small substructures at a certain granularity. The figure on the right illustrates why resolution can be a helpful parameter when using modularity based quality metrics. In the first graph, modularity only captures the large scale structures of the graph; however, in the second example, a more granular quality metric could potentially detect all substructures in a graph. == Algorithm == The Leiden algorithm starts with a graph of disorganized nodes (a) and sorts it by partitioning them to maximize modularity (the difference in quality between the generated partition and a hypothetical randomized partition of communities). The method it uses is similar to the Louvain algorithm, except that after moving each node it also considers that node's neighbors that are not already in the community it was placed in. This process results in our first partition (b), also referred to as P {\displaystyle {\mathcal {P}}} . Then the algorithm refines this partition by first placing each node into its own individual community and then moving them from one community to another to maximize modularity. It does this iteratively until each node has been visited and moved, and each community has been refined - this creates partition (c), which is the initial partition of P refined {\displaystyle {\mathcal {P}}_{\text{refined}}} . Then an aggregate network (d) is created by turning each community into a node. P refined {\displaystyle {\mathcal {P}}_{\text{refined}}} is used as the basis for the aggregate network while P {\displaystyle {\mathcal {P}}} is used to create its initial partition. Because we use the original partition P {\displaystyle {\mathcal {P}}} in this step, we must retain it so that it can be used in future iterations. These steps together form the first iteration of the algorithm. In subsequent iterations, the nodes of the aggregate network (which each represent a community) are once again placed into their own individual communities and then sorted according to modularity to form a new P refined {\displaystyle {\mathcal {P}}_{\text{refined}}} , forming (e) in the above graphic. In the case depicted by the graph, the nodes were already sorted optimally, so no change too
Flask (web framework)
Flask is a micro web framework written in Python. It is classified as a microframework because it does not require particular tools or libraries. It has no database abstraction layer, form validation, or any other components where pre-existing third-party libraries provide common functions. However, Flask supports extensions that can add application features as if they were implemented in Flask itself. Extensions exist for object-relational mappers, form validation, upload handling, various open authentication technologies and several common framework related tools. Applications that use the Flask framework include Pinterest and LinkedIn. == History == Flask was created by Armin Ronacher of Pocoo, an international group of Python enthusiasts formed in 2004. According to Ronacher, the idea was originally an April Fool's joke that was popular enough to make into a serious application. The name is a play on the earlier Bottle framework. When Ronacher and Georg Brandl created a bulletin board system written in Python in 2004, the Pocoo projects Werkzeug and Jinja were developed. In April 2016, the Pocoo team was disbanded and development of Flask and related libraries passed to the newly formed Pallets project. Flask has become popular among Python enthusiasts. As of October 2020, it has the second-most number of stars on GitHub among Python web-development frameworks, only slightly behind Django, and was voted the most popular web framework in the Python Developers Survey for years between and including 2018 and 2022. == Components == The microframework Flask is part of the Pallets Projects (formerly Pocoo), and based on several others of them, all under a BSD license. === Werkzeug === Werkzeug (German for "tool") is a utility library for the Python programming language for Web Server Gateway Interface (WSGI) applications. Werkzeug can instantiate objects for request, response, and utility functions. It can be used as the basis for a custom software framework and supports Python 2.7 and 3.5 and later. === Jinja === Jinja, also by Ronacher, is a template engine for the Python programming language. Similar to the Django web framework, it handles templates in a sandbox. === MarkupSafe === MarkupSafe is a string handling library for the Python programming language. The eponymous MarkupSafe type extends the Python string type and marks its contents as "safe"; combining MarkupSafe with regular strings automatically escapes the unmarked strings, while avoiding double escaping of already marked strings. === ItsDangerous === ItsDangerous is a safe data serialization library for the Python programming language. It is used to store the session of a Flask application in a cookie without allowing users to tamper with the session contents. === Click === Click is a Python package used by Flask to create command-line interfaces (CLI) by providing a simple and composable way to define commands, arguments, and options. == Features == Development server and debugger Integrated support for unit testing RESTful request dispatching Uses Jinja templating Support for secure cookies (client side sessions) 100% WSGI 1.0 compliant Unicode-based Complete documentation Google App Engine compatibility Extensions available to extend functionality == Example == The following code shows a simple web application that displays "Hello World!" when visited: === Render Template with Flask === ==== Jinja in HTML for the Render Template ====
Webometrics
The science of webometrics (also referred to as cybermetrics) aims to quantify the World Wide Web to get knowledge about the number and types of hyperlinks, the structure of the World Wide Web, and using patterns. According to Björneborn and Ingwersen, the definition of webometrics is "the study of the quantitative aspects of the construction and use of information resources, structures and technologies on the Web drawing on bibliometric and informetric approaches." The term webometrics was coined by Almind and Ingwersen (1997). A second definition of webometrics has also been introduced, "the study of web-based content with primarily quantitative methods for social science research goals using techniques that are not specific to one field of study", which emphasizes the development of applied methods for use in the wider social sciences. The purpose of this alternative definition was to help publicize appropriate methods outside the information-science discipline rather than to replace the original definition within information science. Similar scientific fields are: bibliometrics, informetrics, scientometrics, virtual ethnography, and web mining. One relatively straightforward measure is the "web impact factor" (WIF) introduced by Ingwersen (1998). The WIF measure may be defined as the number of web pages in a web site receiving links from other web sites, divided by the number of web pages published in the site that are accessible to the crawler. However, the use of WIF has been disregarded due to the mathematical artifacts derived from power law distributions of these variables. Other similar indicators using size of the institution instead of number of webpages have been proved more useful.
Storage area network
A storage area network (SAN) or storage network is a computer network which provides access to consolidated, block-level data storage. SANs are primarily used to access data storage devices, such as disk arrays and tape libraries from servers so that the devices appear to the operating system as direct-attached storage. A SAN typically is a dedicated network of storage devices not accessible through the local area network (LAN). Although a SAN provides only block-level access, file systems built on top of SANs do provide file-level access and are known as shared-disk file systems. Newer SAN configurations enable hybrid SAN and allow traditional block storage that appears as local storage but also object storage for web services through APIs. == Storage architectures == Storage area networks (SANs) are sometimes referred to as network behind the servers and historically developed out of a centralized data storage model, but with its own data network. A SAN is, at its simplest, a dedicated network for data storage. In addition to storing data, SANs allow for the automatic backup of data, and the monitoring of the storage as well as the backup process. A SAN is a combination of hardware and software. It grew out of data-centric mainframe architectures, where clients in a network can connect to several servers that store different types of data. To scale storage capacities as the volumes of data grew, direct-attached storage (DAS) was developed, where disk arrays or just a bunch of disks (JBODs) were attached to servers. In this architecture, storage devices can be added to increase storage capacity. However, the server through which the storage devices are accessed is a single point of failure, and a large part of the LAN network bandwidth is used for accessing, storing and backing up data. To solve the single point of failure issue, a direct-attached shared storage architecture was implemented, where several servers could access the same storage device. DAS was the first network storage system and is still widely used where data storage requirements are not very high. Out of it developed the network-attached storage (NAS) architecture, where one or more dedicated file server or storage devices are made available in a LAN. Therefore, the transfer of data, particularly for backup, still takes place over the existing LAN. If more than a terabyte of data was stored at any one time, LAN bandwidth became a bottleneck. Therefore, SANs were developed, where a dedicated storage network was attached to the LAN, and terabytes of data are transferred over a dedicated high speed and bandwidth network. Within the SAN, storage devices are interconnected. Transfer of data between storage devices, such as for backup, happens behind the servers and is meant to be transparent. In a NAS architecture data is transferred using the TCP and IP protocols over Ethernet. Distinct protocols were developed for SANs, such as Fibre Channel, iSCSI, Infiniband. Therefore, SANs often have their own network and storage devices, which have to be bought, installed, and configured. This makes SANs inherently more expensive than NAS architectures. == Components == SANs have their own networking devices, such as SAN switches. To access the SAN, so-called SAN servers are used, which in turn connect to SAN host adapters. Within the SAN, a range of data storage devices may be interconnected, such as SAN-capable disk arrays, JBODs and tape libraries. === Host layer === Servers that allow access to the SAN and its storage devices are said to form the host layer of the SAN. Such servers have host adapters, which are cards that attach to slots on the server motherboard (usually PCI slots) and run with a corresponding firmware and device driver. Through the host adapters the operating system of the server can communicate with the storage devices in the SAN. In Fibre channel deployments, a cable connects to the host adapter through the gigabit interface converter (GBIC). GBICs are also used on switches and storage devices within the SAN, and they convert digital bits into light impulses that can then be transmitted over the Fibre Channel cables. Conversely, the GBIC converts incoming light impulses back into digital bits. The predecessor of the GBIC was called gigabit link module (GLM). === Fabric layer === The fabric layer consists of SAN networking devices that include SAN switches, routers, protocol bridges, gateway devices, and cables. SAN network devices move data within the SAN, or between an initiator, such as an HBA port of a server, and a target, such as the port of a storage device. When SANs were first built, hubs were the only devices that were Fibre Channel capable, but Fibre Channel switches were developed and hubs are now rarely found in SANs. Switches have the advantage over hubs that they allow all attached devices to communicate simultaneously, as a switch provides a dedicated link to connect all its ports with one another. When SANs were first built, Fibre Channel had to be implemented over copper cables, these days multimode optical fibre cables are used in SANs. SANs are usually built with redundancy, so SAN switches are connected with redundant links. SAN switches connect the servers with the storage devices and are typically non-blocking allowing transmission of data across all attached wires at the same time. SAN switches are for redundancy purposes set up in a meshed topology. A single SAN switch can have as few as 8 ports and up to 32 ports with modular extensions. So-called director-class switches can have as many as 128 ports. In switched SANs, the Fibre Channel switched fabric protocol FC-SW-6 is used under which every device in the SAN has a hardcoded World Wide Name (WWN) address in the host bus adapter (HBA). If a device is connected to the SAN its WWN is registered in the SAN switch name server. In place of a WWN, or worldwide port name (WWPN), SAN Fibre Channel storage device vendors may also hardcode a worldwide node name (WWNN). The ports of storage devices often have a WWN starting with 5, while the bus adapters of servers start with 10 or 21. === Storage layer === The serialized Small Computer Systems Interface (SCSI) protocol is often used on top of the Fibre Channel switched fabric protocol in servers and SAN storage devices. The Internet Small Computer Systems Interface (iSCSI) over Ethernet and the Infiniband protocols may also be found implemented in SANs, but are often bridged into the Fibre Channel SAN. However, Infiniband and iSCSI storage devices, in particular, disk arrays, are available. The various storage devices in a SAN are said to form the storage layer. It can include a variety of hard disk and magnetic tape devices that store data. In SANs, disk arrays are joined through a RAID which makes a lot of hard disks look and perform like one big storage device. Every storage device, or even partition on that storage device, has a logical unit number (LUN) assigned to it. This is a unique number within the SAN. Every node in the SAN, be it a server or another storage device, can access the storage by referencing the LUN. The LUNs allow for the storage capacity of a SAN to be segmented and for the implementation of access controls. A particular server, or a group of servers, may, for example, be only given access to a particular part of the SAN storage layer, in the form of LUNs. When a storage device receives a request to read or write data, it will check its access list to establish whether the node, identified by its LUN, is allowed to access the storage area, also identified by a LUN. LUN masking is a technique whereby the host bus adapter and the SAN software of a server restrict the LUNs for which commands are accepted. In doing so LUNs that should never be accessed by the server are masked. Another method to restrict server access to particular SAN storage devices is fabric-based access control, or zoning, which is enforced by the SAN networking devices and servers. Under zoning, server access is restricted to storage devices that are in a particular SAN zone. == Network protocols == A mapping layer to other protocols is used to form a network: ATA over Ethernet (AoE), mapping of AT Attachment (ATA) over Ethernet Fibre Channel Protocol (FCP), a mapping of SCSI over Fibre Channel Fibre Channel over Ethernet (FCoE) ESCON over Fibre Channel (FICON), used by mainframe computers HyperSCSI, mapping of SCSI over Ethernet iFCP or SANoIP mapping of FCP over IP iSCSI, mapping of SCSI over TCP/IP iSCSI Extensions for RDMA (iSER), mapping of iSCSI over InfiniBand Network block device, mapping device node requests on UNIX-like systems over stream sockets like TCP/IP SCSI RDMA Protocol (SRP), another SCSI implementation for remote direct memory access (RDMA) transports Storage networks may also be built using Serial Attached SCSI (SAS) and Serial ATA (SATA) technologies. SAS evolved from SCSI direct-attached storage. SATA evolved from Para
User-subjective approach
The user-subjective approach is the first interaction design approach dedicated specifically to personal information management (PIM). The approach offers design principles with which PIM systems (e.g. operating systems, email applications and web browsers) can make systematic use of subjective (i.e. user-dependent) attributes. The approach evolved in three stages: (a) theoretical foundations first published in a Journal of the American Society for Information Science and Technology during 2003. The paper introduces the approach and its design principles (b) evidence and implementation was published in another JASIST paper in 2008. The paper gives empirical evidence in support of the approach as well as seven novel design schemes that derives from it. It has won the Best JASIST paper award in 2009.(c) specific design evaluation this stage has already begun with evaluation of the first user-subjective design prototype called GrayArea in a Conference on Human Factors in Computing Systems paper published in 2009. == Theoretical foundations == The user-subjective approach takes advantage of the fact that in PIM the person who retrieves the information is the same person who had previously stored it. PIM can be seen as a communication between the person and him\her self at two different times: the time of storage and the time of retrieval. The PIM system design should help facilitate that unique communication by allowing the user use subjective (user-dependent) attributes in addition to the standard objective ones. PIM systems should capture these subjective attributes when the user interacts with the information item (either automatically or by using direct manipulation interface) in order to help the user retrieve the item later on. The user-subjective approach identifies three subjective attributes – the project which the item was classified to, its degree of importance to the user, and the context in which the item was used during the interaction with it. The approach also assigns a design principle for each. The principles (discussed below) are deliberately abstract to allow for a variety of different implementations. === The subjective project classification principle === The subjective project classification principle suggests that PIM systems design should allow all information items related to a project be classified under the same category regardless of whether they are files, emails, Web Favorites or of any other format. This stands in sharp contrast with the present PIM system design where there are distinct folder hierarchies for each of these formats. The current design forces the user to store information related to a single project in separate locations depending on their format causing the project fragmentation problem. === The subjective importance principle === The subjective importance principle suggests that the subjective importance of information should affect its degree of visual salience and accessibility: important information items should be highly visible and accessible as they are more likely to be retrieved (the promotion principle) and those of lower importance should be demoted (i.e. making them less visible) so as not to distract the user (the demotion principle). While the promotion principle is not new and has been widely applied in PIM system design, the demotion principle is novel and has been applied only sporadically in these systems. Currently these systems allow only two options: keeping information (where unneeded information items could clutter folders and obscure the target item) and deleting it (where there is a risk that the item will not be there when needed). Demotion suggests a third option where the item is less visible so it doesn’t distract the user but is kept within its original context in case the user would need it after all. === The subjective context principle === The subjective context principle suggests that PIM systems should allow users retrieve their information items in the same context that they had previously used in order to bridge the time gap between these two events. By "context" the approach refers to other information items that were used at the time of interaction with the item, thoughts that the users may have regarding the item, the phase the user got to in the interaction with the item and other people the user collaborates with regarding the information item. == Evidence and implementations == === Evidence === The user-subjective approach was evaluated in a multioperational designed study which used questionnaires, screen shots and in-depth interviews (N = 84). The research tested the use of subjective attributes in current PIM systems and its dependency on design. Results show that participants used subjective attributes whenever design allowed them to. When it didn't, they either used their own alternative ways to use these attributes or avoided using subjective attributes at all. Regarding the subjective project classification principle – many of the participants' recent files, emails and web pages related to the same projects (indicating that they were working on the same project using different formats), and they had saved files of different format in the same project folders. However, as design does not suggest storing emails and web favorites with files, users avoid doing so. Regarding the subjective importance principle – users tended to retrieve their important information from highly visible and accessible locations offered by current design (e.g. by using the desktop), however since current systems offers no way to demote files of low subjective importance participants tended to use their own walk around ways for doing so (e.g. by moving them to a folder called "old" inside their original folder). Regarding the subjective context principle – participants tended to talk spontaneously about the context of their information items during the interview. These evidence imply that current PIM systems could possibly be improved if it would allow users to make more use of subjective attributes of their personal information. === Implementations === Each of the user-subjective design principles can be implemented in various ways. Moreover, as the approach is generative it offers PIM designers to use these principles in order to create their own user subjective designs. Below are design schemes that demonstrate an implementation of each of the principles. A more complete set of implementation examples can be found in the user-subjective website Archived 2011-02-01 at the Wayback Machine. The single hierarchy solution – addresses the project fragmentation problem (the current situation where the users stores and retrieve their project-related files, emails and web favorites at different hierarchies) and implements the subjective classification principle by offering the user a single folder hierarchy for all information items. At the operation system level the users would navigate to a folder and find there all project related files, emails, web favorites, tasks, contacts and notes. This would allow them to retrieve all their project-related information items from a single location regardless of their formats. When looking at these folders at their mail box the users would see only their emails and only web favorites through their browser. The single hierarchy design scheme has not been evaluated yet. GrayArea – implements the demotion principle by allowing users to move subjectively unimportant files to a gray area at the bottom end of their folders. This clears the upper part of the folder from file that are unlikely to be retrieved while allowing the users to retrieve these unimportant file in their original context in case they are needed after all. GrayArea design scheme was positively evaluated (see next section). ItemHistory – is an implementation of the subjective context principle. It allows users to reach all information items that were previously retrieved while that information item was open. This design scheme has not been evaluated to date. == Specific design evaluation == The evaluation of specific designs is the third and final step of the approach development. It had begun with the assessment of GrayArea. === GrayArea evaluation === GrayArea was evaluated by using a prototype that simulated the participants' folders but included a gray area where they could drag & drop their subjectively unimportant files. In the study 96 participants were asked to clean up their folders from unimportant files once with GrayArea and once without it. Results show that the use of GrayArea reduced the clutter in folders, that it was easier for participants to demote files than to delete them and that they would use it if provided in their next operating system. These results encourage commercial implementation of GrayArea and the development and testing of other user-subjective designs. == Chronological development == The user-subjective approach was developed by
Imaging phantom
An imaging phantom, or simply phantom (less commonly spelled fantom), is a specially designed object that is scanned or imaged in the field of medical imaging to evaluate, analyze, and tune the performance of various imaging devices. A phantom is more readily available and provides more consistent results than the use of a living subject or cadaver, while also avoiding direct risks to living subjects. Phantoms were originally employed in 2D x-ray–based imaging techniques such as radiography or fluoroscopy, but more recently phantoms with desired imaging characteristics have been developed for 3D techniques such as SPECT, MRI, CT, ultrasound, PET, and other imaging modalities. == Design == A phantom used to evaluate an imaging device should respond in a similar manner to how human tissues and organs would act in that specific imaging modality. For instance, phantoms made for 2D radiography may hold various quantities of x-ray contrast agents with similar x-ray absorbing properties (such as the attenuation coefficient) to normal tissue to tune the contrast of the imaging device or modulate the patient's exposure to radiation. In such a case, the radiography phantom would not necessarily need to have similar textures and mechanical properties since these are not relevant in x-ray imaging modalities. However, in the case of ultrasonography, a phantom with similar rheological and ultrasound scattering properties to real tissue would be essential, but x-ray absorbing properties would not be relevant. The term "phantom" describes an object that is designed to resemble human tissue and can be evaluated, analyzed or manipulated to study the performance of a medical device. Phantoms are created using a digital file that is rendered through magnetic resonance imaging (MRI) or computer-aided design (CAD). The digital files allow for quick modifications that are read by the 3D printer. The 3D printer will create the product in successive layers using polymeric materials. There are several types of phantoms including tissue-mimicking, radiological phantoms, dental phantoms, BOMABs (used to calibrate whole-body counters), and more.
Semantic translation
Semantic translation is the process of using semantic information to aid in the translation of data in one representation or data model to another representation or data model. Semantic translation takes advantage of semantics that associate meaning with individual data elements in one dictionary to create an equivalent meaning in a second system. An example of semantic translation is the conversion of XML data from one data model to a second data model using formal ontologies for each system such as the Web Ontology Language (OWL). This is frequently required by intelligent agents that wish to perform searches on remote computer systems that use different data models to store their data elements. The process of allowing a single user to search multiple systems with a single search request is also known as federated search. Semantic translation should be differentiated from data mapping tools that do simple one-to-one translation of data from one system to another without actually associating meaning with each data element. Semantic translation requires that data elements in the source and destination systems have "semantic mappings" to a central registry or registries of data elements. The simplest mapping is of course where there is equivalence. There are three types of Semantic equivalence: Class Equivalence - indicating that class or "concepts" are equivalent. For example: "Person" is the same as "Individual" Property Equivalence - indicating that two properties are equivalent. For example: "PersonGivenName" is the same as "FirstName" Instance Equivalence - indicating that two individual instances of objects are equivalent. For example: "Dan Smith" is the same person as "Daniel Smith" Semantic translation is very difficult if the terms in a particular data model do not have direct one-to-one mappings to data elements in a foreign data model. In that situation, an alternative approach must be used to find mappings from the original data to the foreign data elements. This problem can be alleviated by centralized metadata registries that use the ISO-11179 standards such as the National Information Exchange Model (NIEM).