The March algorithm is a widely used algorithm that tests SRAM memory by filling all its entries test patterns. It carries out several passes through an SRAM checking the patterns and writing new patterns. The SRAM read and write operations performed on each pass are called a March element and each element is repeated for each entry. The March algorithm is often used to find functional faults in SRAM during testing such as: Stuck-at Faults (SAFs) Transition Faults (TFs) Address Decoder Faults (AFs) Coupling Faults (CFs), such as Inversion (CFin), Idempotent (CFid), and State (CFst) coupling faults It has been suggested to test SRAM modules using the algorithm before sale using a built-in self-test mechanism. == Notation == Each pass in a test sequence is represented by an "element". An element consists of a vertical arrow to indicate the direction in which the memory is scanned followed by a list of read/write operations to be applied to each memory cell. Multiple elements can be listed, separated by semicolons, to form a "test". For example, { ⇕ ( w 0 ) ; ⇑ ( r 0 , w 1 ) ; ⇓ ( r 1 , w 0 , r 0 ) } {\displaystyle \{\Updownarrow (w0);\Uparrow (r0,w1);\Downarrow (r1,w0,r0)\}} specifies to: Scan in both directions, writing 0. Scan from lowest to highest address, reading 0 and writing 1. Scan from highest to lowest address, reading 1, writing 0 and reading 0. == Variants == Many variants of the March algorithm exist with different sequences of tests. Each variant makes a different tradeoff between what faults it can detect and the complexity of the algorithm. Several variants have been given names:
Ware report
Security Controls for Computer Systems, commonly called the Ware report, is a 1970 text by Willis Ware that was foundational in the field of computer security. == Development == A defense contractor in St. Louis, Missouri, had bought an IBM mainframe computer, which it was using for classified work on a fighter aircraft. To provide additional income, the contractor asked the Department of Defense (DoD) for permission to sell computer time on the mainframe to local businesses via remote terminals, while the classified work continued. At the time, the DoD did not have a policy to cover this. The DoD's Advanced Research Projects Agency (DARPA) asked Ware - a RAND employee - to chair a committee to examine and report on the feasibility of security controls for computer systems. The committee's report was a classified document given in January 1970 to the Defense Science Board (DSB), which had taken over the project from ARPA. After declassification, the report was published by RAND in October 1979. == Influence == The IEEE Computer Society said the report was widely circulated, and the IEEE Annals of the History of Computing said that it, together with Ware's 1967 Spring Joint Computer Conference session, marked the start of the field of computer security. The report influenced security certification standards and processes, especially in the banking and defense industries, where the report was instrumental in creating the Orange Book.
Multispectral pattern recognition
Multispectral remote sensing is the collection and analysis of reflected, emitted, or back-scattered energy from an object or an area of interest in multiple bands of regions of the electromagnetic spectrum (Jensen, 2005). Subcategories of multispectral remote sensing include hyperspectral, in which hundreds of bands are collected and analyzed, and ultraspectral remote sensing where many hundreds of bands are used (Logicon, 1997). The main purpose of multispectral imaging is the potential to classify the image using multispectral classification. This is a much faster method of image analysis than is possible by human interpretation. == Multispectral remote sensing systems == Remote sensing systems gather data via instruments typically carried on satellites in orbit around the Earth. The remote sensing scanner detects the energy that radiates from the object or area of interest. This energy is recorded as an analog electrical signal and converted into a digital value though an A-to-D conversion. There are several multispectral remote sensing systems that can be categorized in the following way: === Multispectral imaging using discrete detectors and scanning mirrors === Landsat Multispectral Scanner (MSS) Landsat Thematic Mapper (TM) NOAA Geostationary Operational Environmental Satellite (GOES) NOAA Advanced Very High Resolution Radiometer (AVHRR) NASA and ORBIMAGE, Inc., Sea-viewing Wide field-of-view Sensor (SeaWiFS) Daedalus, Inc., Aircraft Multispectral Scanner (AMS) NASA Airborne Terrestrial Applications Sensor (ATLAS) === Multispectral imaging using linear arrays === SPOT 1, 2, and 3 High Resolution Visible (HRV) sensors and Spot 4 and 5 High Resolution Visible Infrared (HRVIR) and vegetation sensor Indian Remote Sensing System (IRS) Linear Imaging Self-scanning Sensor (LISS) Space Imaging, Inc. (IKONOS) Digital Globe, Inc. (QuickBird) ORBIMAGE, Inc. (OrbView-3) ImageSat International, Inc. (EROS A1) NASA Terra Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) NASA Terra Multiangle Imaging Spectroradiometer (MISR) === Imaging spectrometry using linear and area arrays === NASA Jet Propulsion Laboratory Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) Compact Airborne Spectrographic Imager 3 (CASI 3) NASA Terra Moderate Resolution Imaging Spectrometer (MODIS) NASA Earth Observer (EO-1) Advanced Land Imager (ALI), Hyperion, and LEISA Atmospheric Corrector (LAC) === Satellite analog and digital photographic systems === Russian SPIN-2 TK-350, and KVR-1000 NASA Space Shuttle and International Space Station Imagery == Multispectral classification methods == A variety of methods can be used for the multispectral classification of images: Algorithms based on parametric and nonparametric statistics that use ratio-and interval-scaled data and nonmetric methods that can also incorporate nominal scale data (Duda et al., 2001), Supervised or unsupervised classification logic, Hard or soft (fuzzy) set classification logic to create hard or fuzzy thematic output products, Per-pixel or object-oriented classification logic, and Hybrid approaches == Supervised classification == In this classification method, the identity and location of some of the land-cover types are obtained beforehand from a combination of fieldwork, interpretation of aerial photography, map analysis, and personal experience. The analyst would locate sites that have similar characteristics to the known land-cover types. These areas are known as training sites because the known characteristics of these sites are used to train the classification algorithm for eventual land-cover mapping of the remainder of the image. Multivariate statistical parameters (means, standard deviations, covariance matrices, correlation matrices, etc.) are calculated for each training site. All pixels inside and outside of the training sites are evaluated and allocated to the class with the more similar characteristics. === Classification scheme === The first step in the supervised classification method is to identify the land-cover and land-use classes to be used. Land-cover refers to the type of material present on the site (e.g. water, crops, forest, wet land, asphalt, and concrete). Land-use refers to the modifications made by people to the land cover (e.g. agriculture, commerce, settlement). All classes should be selected and defined carefully to properly classify remotely sensed data into the correct land-use and/or land-cover information. To achieve this purpose, it is necessary to use a classification system that contains taxonomically correct definitions of classes. If a hard classification is desired, the following classes should be used: Mutually exclusive: there is not any taxonomic overlap of any classes (i.e., rain forest and evergreen forest are distinct classes). Exhaustive: all land-covers in the area have been included. Hierarchical: sub-level classes (e.g., single-family residential, multiple-family residential) are created, allowing that these classes can be included in a higher category (e.g., residential). Some examples of hard classification schemes are: American Planning Association Land-Based Classification System United States Geological Survey Land-use/Land-cover Classification System for Use with Remote Sensor Data U.S. Department of the Interior Fish and Wildlife Service U.S. National Vegetation and Classification System International Geosphere-Biosphere Program IGBP Land Cover Classification System === Training sites === Once the classification scheme is adopted, the image analyst may select training sites in the image that are representative of the land-cover or land-use of interest. If the environment where the data was collected is relatively homogeneous, the training data can be used. If different conditions are found in the site, it would not be possible to extend the remote sensing training data to the site. To solve this problem, a geographical stratification should be done during the preliminary stages of the project. All differences should be recorded (e.g. soil type, water turbidity, crop species, etc.). These differences should be recorded on the imagery and the selection training sites made based on the geographical stratification of this data. The final classification map would be a composite of the individual stratum classifications. After the data are organized in different training sites, a measurement vector is created. This vector would contain the brightness values for each pixel in each band in each training class. The mean, standard deviation, variance-covariance matrix, and correlation matrix are calculated from the measurement vectors. Once the statistics from each training site are determined, the most effective bands for each class should be selected. The objective of this discrimination is to eliminate the bands that can provide redundant information. Graphical and statistical methods can be used to achieve this objective. Some of the graphic methods are: Bar graph spectral plots Cospectral mean vector plots Feature space plots Cospectral parallelepiped or ellipse plots === Classification algorithm === The last step in supervised classification is selecting an appropriate algorithm. The choice of a specific algorithm depends on the input data and the desired output. Parametric algorithms are based on the fact that the data is normally distributed. If the data is not normally distributed, nonparametric algorithms should be used. The more common nonparametric algorithms are: One-dimensional density slicing Parallelipiped Minimum distance Nearest-neighbor Expert system analysis Convolutional neural network == Unsupervised classification == Unsupervised classification (also known as clustering) is a method of partitioning remote sensor image data in multispectral feature space and extracting land-cover information. Unsupervised classification require less input information from the analyst compared to supervised classification because clustering does not require training data. This process consists in a series of numerical operations to search for the spectral properties of pixels. From this process, a map with m spectral classes is obtained. Using the map, the analyst tries to assign or transform the spectral classes into thematic information of interest (i.e. forest, agriculture, urban). This process may not be easy because some spectral clusters represent mixed classes of surface materials and may not be useful. The analyst has to understand the spectral characteristics of the terrain to be able to label clusters as a specific information class. There are hundreds of clustering algorithms. Two of the most conceptually simple algorithms are the chain method and the ISODATA method. === Chain method === The algorithm used in this method operates in a two-pass mode (it passes through the multispectral dataset two times. In the first pass, the program reads through the dataset and sequentially builds clusters (groups of p
ARKA descriptors in QSAR
In computational chemistry and cheminformatics, ARKA descriptors in QSAR are a class of molecular descriptors used in quantitative structure–activity relationship (QSAR) modeling (or related approaches such as QSPR and QSTR), a computational method for predicting the biological activity or toxicity of chemical compounds based on their molecular structure. Molecular descriptors are numerical values that summarize information about a molecule's structure, topology, geometry, or physicochemical properties in a form suitable for machine learning or statistical modeling. ARKA (Arithmetic Residuals in K-Groups Analysis) descriptors differ from traditional descriptors by encoding atomic-level information through recursive autoregression techniques, which aim to capture subtle structural patterns and improve predictive accuracy. They are designed to be both interpretable and well-suited to modeling nonlinear relationships in QSAR studies. == Comparisons == While QSAR is essentially a similarity-based approach, the occurrence of activity/property cliffs may greatly reduce the predictive accuracy of the developed models. The novel Arithmetic Residuals in K-groups Analysis (ARKA) approach is a supervised dimensionality reduction technique developed by the DTC Laboratory, Jadavpur University that can easily identify activity cliffs in a data set. Activity cliffs are similar in their structures but differ considerably in their activity. The basic idea of the ARKA descriptors is to group the conventional QSAR descriptors based on a predefined criterion and then assign weightage to each descriptor in each group. ARKA descriptors have also been used to develop classification-based and regression-based QSAR models with acceptable quality statistics. The ARKA descriptors have been used for the identification of activity cliffs in QSAR studies and/or model development by multiple researchers. A tutorial presentation on the ARKA descriptors is available. Recently a multi-class ARKA framework has been proposed for improved q-RASAR model generation.
GeWorkbench
geWorkbench (genomics Workbench) is an open-source software platform for integrated genomic data analysis. It is a desktop application written in the programming language Java. geWorkbench uses a component architecture. As of 2016, there are more than 70 plug-ins available, providing for the visualization and analysis of gene expression, sequence, and structure data. geWorkbench is the Bioinformatics platform of MAGNet, the National Center for the Multi-scale Analysis of Genomic and Cellular Networks, one of the 8 National Centers for Biomedical Computing funded through the NIH Roadmap (NIH Common Fund). Many systems and structure biology tools developed by MAGNet investigators are available as geWorkbench plugins. == Features == Computational analysis tools such as t-test, hierarchical clustering, self-organizing maps, regulatory network reconstruction, BLAST searches, pattern-motif discovery, protein structure prediction, structure-based protein annotation, etc. Visualization of gene expression (heatmaps, volcano plot), molecular interaction networks (through Cytoscape), protein sequence and protein structure data (e.g., MarkUs). Integration of gene and pathway annotation information from curated sources as well as through Gene Ontology enrichment analysis. Component integration through platform management of inputs and outputs. Among data that can be shared between components are expression datasets, interaction networks, sample and marker (gene) sets and sequences. Dataset history tracking - complete record of data sets used and input settings. Integration with 3rd party tools such as GenePattern, Cytoscape, and Genomespace. Demonstrations of each feature described can be found at GeWorkbench-web Tutorials. == Versions == geWorkbench is open-source software that can be downloaded and installed locally. A zip file of the released version Java source is also available. Prepackaged installer versions also exist for Windows, Macintosh, and Linux.
Integreat
Integreat (former project name: Refguide+) is an open source mobile app that provides local information and services tailored to refugees and migrants coming to Germany. The content is maintained by local organizations, such as local governments or integration officers, and made available in locally relevant languages. It was developed by Tür an Tür - Digitalfabrik gGmbH (formerly Tür an Tür - Digital Factory gGmbH) in Augsburg together with a team of researchers and students from the Technical University of Munich. == History == In 1997, the Augsburg association "Tür an Tür", which has been working for refugees since 1992, published the brochure "First Steps", which answers local everyday questions. Since addresses and contact persons change quickly, some information is already outdated after a few weeks. Students of business informatics at the Technical University of Munich therefore developed the app Integreat within eight months together with the association and the social department of the city of Augsburg. The app was then also used by other cities and districts within months. As of February 3, 2022, information is available at 72 locations, including Munich, Dortmund, Nuremberg and Augsburg. == Mode of action == Refugees need information on areas such as registration, contact persons, health care, education, family, work and everyday life. Integreat seeks to provide refugees with this information by allowing them to select their geographic location and receive locally relevant information. This information is available offline once the app is opened so it can be used without an internet connection. In addition, the content is translated into the native languages of refugees and migrants to facilitate access. The content is licensed with a CC BY 4.0 license to facilitate collaboration and translation between content creators and dissemination of the content. Integreat is now being used for a broader migrant audience and says it can also support professionals, volunteers, and counseling centers. == Comparable mobile apps == Other mobile apps that are likewise intended to provide initial orientation for refugees include the app Ankommen, a joint project of the Federal Office for Migration and Refugees, the Goethe-Institut, the Federal Employment Agency and the Bavarian Broadcasting Corporation, which is intended as a companion for the first few weeks in Germany, and the Welcome App, a company-sponsored non-profit initiative for information about Germany and asylum procedures with a regional focus, and a book by the Konrad Adenauer Foundation (KAS) and Verlag Herder with a corresponding app Deutschland - Erste Informationen für Flüchtlinge (Germany - First Information for Refugees) as a companion for Arabic-speaking refugees in Germany.
Robust principal component analysis
Robust Principal Component Analysis (RPCA) is a modification of the widely used statistical procedure of principal component analysis (PCA) which works well with respect to grossly corrupted observations. A number of different approaches exist for Robust PCA, including an idealized version of Robust PCA, which aims to recover a low-rank matrix L0 from highly corrupted measurements M = L0 +S0. This decomposition in low-rank and sparse matrices can be achieved by techniques such as Principal Component Pursuit method (PCP), Stable PCP, Quantized PCP, Block based PCP, and Local PCP. Then, optimization methods are used such as the Augmented Lagrange Multiplier Method (ALM), Alternating Direction Method (ADM), Fast Alternating Minimization (FAM), Iteratively Reweighted Least Squares (IRLS ) or alternating projections (AP). == Algorithms == === Non-convex method === The 2014 guaranteed algorithm for the robust PCA problem (with the input matrix being M = L + S {\displaystyle M=L+S} ) is an alternating minimization type algorithm. The computational complexity is O ( m n r 2 log 1 ϵ ) {\displaystyle O\left(mnr^{2}\log {\frac {1}{\epsilon }}\right)} where the input is the superposition of a low-rank (of rank r {\displaystyle r} ) and a sparse matrix of dimension m × n {\displaystyle m\times n} and ϵ {\displaystyle \epsilon } is the desired accuracy of the recovered solution, i.e., ‖ L ^ − L ‖ F ≤ ϵ {\displaystyle \|{\widehat {L}}-L\|_{F}\leq \epsilon } where L {\displaystyle L} is the true low-rank component and L ^ {\displaystyle {\widehat {L}}} is the estimated or recovered low-rank component. Intuitively, this algorithm performs projections of the residual onto the set of low-rank matrices (via the SVD operation) and sparse matrices (via entry-wise hard thresholding) in an alternating manner - that is, low-rank projection of the difference the input matrix and the sparse matrix obtained at a given iteration followed by sparse projection of the difference of the input matrix and the low-rank matrix obtained in the previous step, and iterating the two steps until convergence. This alternating projections algorithm is later improved by an accelerated version, coined AccAltProj. The acceleration is achieved by applying a tangent space projection before projecting the residue onto the set of low-rank matrices. This trick improves the computational complexity to O ( m n r log 1 ϵ ) {\displaystyle O\left(mnr\log {\frac {1}{\epsilon }}\right)} with a much smaller constant in front while it maintains the theoretically guaranteed linear convergence. Another fast version of accelerated alternating projections algorithm is IRCUR. It uses the structure of CUR decomposition in alternating projections framework to dramatically reduces the computational complexity of RPCA to O ( max { m , n } r 2 log ( m ) log ( n ) log 1 ϵ ) {\displaystyle O\left(\max\{m,n\}r^{2}\log(m)\log(n)\log {\frac {1}{\epsilon }}\right)} === Convex relaxation === This method consists of relaxing the rank constraint r a n k ( L ) {\displaystyle rank(L)} in the optimization problem to the nuclear norm ‖ L ‖ ∗ {\displaystyle \|L\|_{}} and the sparsity constraint ‖ S ‖ 0 {\displaystyle \|S\|_{0}} to ℓ 1 {\displaystyle \ell _{1}} -norm ‖ S ‖ 1 {\displaystyle \|S\|_{1}} . The resulting program can be solved using methods such as the method of Augmented Lagrange Multipliers. === Deep-learning augmented method === Some recent works propose RPCA algorithms with learnable/training parameters. Such a learnable/trainable algorithm can be unfolded as a deep neural network whose parameters can be learned via machine learning techniques from a given dataset or problem distribution. The learned algorithm will have superior performance on the corresponding problem distribution. == Applications == RPCA has many real life important applications particularly when the data under study can naturally be modeled as a low-rank plus a sparse contribution. Following examples are inspired by contemporary challenges in computer science, and depending on the applications, either the low-rank component or the sparse component could be the object of interest: === Video surveillance === Given a sequence of surveillance video frames, it is often required to identify the activities that stand out from the background. If we stack the video frames as columns of a matrix M, then the low-rank component L0 naturally corresponds to the stationary background and the sparse component S0 captures the moving objects in the foreground. === Face recognition === Images of a convex, Lambertian surface under varying illuminations span a low-dimensional subspace. This is one of the reasons for effectiveness of low-dimensional models for imagery data. In particular, it is easy to approximate images of a human's face by a low-dimensional subspace. To be able to correctly retrieve this subspace is crucial in many applications such as face recognition and alignment. It turns out that RPCA can be applied successfully to this problem to exactly recover the face.